Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7485119   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 ppo-r.4   7485119   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 ppo-m.4   7485119   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 gma-u.5   100807160   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 gma-u.5   100789776   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 mtr-u.5   25490721   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 ath-u.5   AT4G26600   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-u.5   OLI2   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 bra-r.6   103866374   25S rRNA (cytosine-C(5))-methyltransferase nop2 
 bra-r.6   103851856   probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 
 bra-r.6   103846122   25S rRNA (cytosine-C(5))-methyltransferase nop2 
 vvi-u.5   100265196   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 ghi-r.1   107922470   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 ghi-r.1   107918642   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 ghi-r.1   107893508   26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like 
 bna-r.1   106389706   25S rRNA (cytosine-C(5))-methyltransferase NOP2A 
 bna-r.1   106447649   25S rRNA (cytosine-C(5))-methyltransferase NOP2A 
 bna-r.1   106444937   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 cit-r.1   102620350   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 sly-u.5   101256604   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 sly-u.5   101247282   26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like 
 sot-r.1   102592311   25S rRNA (cytosine-C(5))-methyltransferase nop2-like 
 sot-r.1   102603613   25S rRNA (cytosine-C(5))-methyltransferase nop2-like 
 sot-r.1   102592987   25S rRNA (cytosine-C(5))-methyltransferase nop2-like 
 nta-r.1   107827033   26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like 
 nta-r.1   107763385   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 osa-u.5   4330579   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 osa-u.5   4347787   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 zma-u.5   103627666   25S rRNA (cytosine-C(5))-methyltransferase nop2 
 zma-u.5   100191678   S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 
 tae-r.2   123138078   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 tae-r.2   123128246   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 tae-r.2   123145347   26S rRNA (cytosine-C(5))-methyltransferase NOP2B 
 sbi-r.1   8071757   25S rRNA (cytosine-C(5))-methyltransferase nop2 
 bdi-r.1   100833497   25S rRNA (cytosine-C(5))-methyltransferase nop2 
 cre-r.1   CHLRE_06g273413v5   uncharacterized protein 

close


Top 50 coexpressed genes to 7485119 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 7485119 (ppo-u.5 coexpression data)

CoexMap"7485119"


ppoLOC7485119 | Entrez gene ID : 7485119    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae sbi bdi cre hvu
Paralog 3 2 1 2 3 1 3 3 1 2 3 2 2 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070475 [list] [network] rRNA base methylation  (22 genes)  IEA  
GO:0000470 [list] [network] maturation of LSU-rRNA  (36 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (220 genes)  IEA  
GO MF
GO:0009383 [list] [network] rRNA (cytosine-C5-)-methyltransferase activity  (1 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
Protein XP_002300386.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 2  (predict for XP_002300386.2)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_002300386.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7485119
ppo-r.4
for
7485119
ppo-m.4
for
7485119
gma-u.5
for
100807160
gma-u.5
for
100789776
mtr-u.5
for
25490721
ath-u.5
for
AT4G26600
ath-u.5
for
OLI2
bra-r.6
for
103866374
bra-r.6
for
103851856
bra-r.6
for
103846122
vvi-u.5
for
100265196
ghi-r.1
for
107922470
ghi-r.1
for
107918642
ghi-r.1
for
107893508
bna-r.1
for
106389706
bna-r.1
for
106447649
bna-r.1
for
106444937
cit-r.1
for
102620350
sly-u.5
for
101256604
sly-u.5
for
101247282
sot-r.1
for
102592311
sot-r.1
for
102603613
sot-r.1
for
102592987
nta-r.1
for
107827033
nta-r.1
for
107763385
osa-u.5
for
4330579
osa-u.5
for
4347787
zma-u.5
for
103627666
zma-u.5
for
100191678
tae-r.2
for
123138078
tae-r.2
for
123128246
tae-r.2
for
123145347
sbi-r.1
for
8071757
bdi-r.1
for
100833497
cre-r.1
for
CHLRE_06g273413v5


Ortholog ID: 5353
Species ppo gma gma mtr ath ath bra bra bra vvi ghi ghi ghi bna bna bna cit sly sly sot sot sot nta nta osa osa zma zma tae tae tae sbi bdi cre
Symbol LOC7485119 LOC100807160 LOC100789776 LOC25490721 AT4G26600 OLI2 LOC103866374 LOC103851856 LOC103846122 LOC100265196 LOC107922470 LOC107893508 LOC107888173 LOC106447649 LOC106400887 LOC106380872 LOC102620350 LOC101256604 LOC101247282 LOC102592311 LOC102603613 LOC102592987 LOC107827033 LOC107763385 LOC4330579 LOC4347787 LOC103627666 LOC100191678 LOC123138078 LOC123128246 LOC123145347 LOC8071757 LOC100833497 CHLRE_06g273413v5
Function* 26S rRNA (cytosine-C(5))-methyltransferase NOP2B 26S rRNA (cytosine-C(5))-methyltransferase NOP2B 26S rRNA (cytosine-C(5))-methyltransferase NOP2B 26S rRNA (cytosine-C(5))-methyltransferase NOP2B S-adenosyl-L-methionine-dependent methyltransferases superfamily protein S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 25S rRNA (cytosine-C(5))-methyltransferase nop2 probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 25S rRNA (cytosine-C(5))-methyltransferase nop2 26S rRNA (cytosine-C(5))-methyltransferase NOP2B 26S rRNA (cytosine-C(5))-methyltransferase NOP2B 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like 26S rRNA (cytosine-C(5))-methyltransferase NOP2B 25S rRNA (cytosine-C(5))-methyltransferase NOP2A 25S rRNA (cytosine-C(5))-methyltransferase NOP2A-like 25S rRNA (cytosine-C(5))-methyltransferase NOP2A 26S rRNA (cytosine-C(5))-methyltransferase NOP2B 26S rRNA (cytosine-C(5))-methyltransferase NOP2B 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like 25S rRNA (cytosine-C(5))-methyltransferase nop2-like 25S rRNA (cytosine-C(5))-methyltransferase nop2-like 25S rRNA (cytosine-C(5))-methyltransferase nop2-like 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like 26S rRNA (cytosine-C(5))-methyltransferase NOP2B 26S rRNA (cytosine-C(5))-methyltransferase NOP2B 26S rRNA (cytosine-C(5))-methyltransferase NOP2B 25S rRNA (cytosine-C(5))-methyltransferase nop2 S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 26S rRNA (cytosine-C(5))-methyltransferase NOP2B 26S rRNA (cytosine-C(5))-methyltransferase NOP2B 26S rRNA (cytosine-C(5))-methyltransferase NOP2B 25S rRNA (cytosine-C(5))-methyltransferase nop2 25S rRNA (cytosine-C(5))-methyltransferase nop2 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi03010 Ribosome 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03010 Ribosome 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot04016 MAPK signaling pathway - plant 4
sot04075 Plant hormone signal transduction 4
sot04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
nta03008 Ribosome biogenesis in eukaryotes 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7485119 100807160 100789776 25490721 828767 835690 103866374 103851856 103846122 100265196 107922470 107893508 107888173 106447649 106400887 106380872 102620350 101256604 101247282 102592311 102603613 102592987 107827033 107763385 4330579 4347787 103627666 100191678 123138078 123128246 123145347 8071757 100833497 5721792
The preparation time of this page was 0.2 [sec].