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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7485155   suppressor of mec-8 and unc-52 protein homolog 1 
 ppo-r.4   7485155   suppressor of mec-8 and unc-52 protein homolog 1 
 ppo-m.4   7485155   suppressor of mec-8 and unc-52 protein homolog 1 
 gma-u.5   100792582   suppressor of mec-8 and unc-52 protein homolog 1 
 gma-u.5   100775852   suppressor of mec-8 and unc-52 protein homolog 1 
 mtr-u.5   11425250   suppressor of mec-8 and unc-52 protein homolog 1 
 ath-u.5   SMU1   transducin family protein / WD-40 repeat family protein 
 vvi-u.5   100241550   suppressor of mec-8 and unc-52 protein homolog 1 
 sly-u.5   544252   WD-40 repeat protein 
 osa-u.5   4326991   suppressor of mec-8 and unc-52 protein homolog 1 
 zma-u.5   100381399   Suppressor of mec-8 and unc-52 protein homolog 1 

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Top 50 coexpressed genes to 7485155 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7485155 (ppo-u.5 coexpression data)

CoexMap"7485155"


ppoLOC7485155 | Entrez gene ID : 7485155    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (213 genes)  IEA  
GO CC
GO:0071011 [list] [network] precatalytic spliceosome  (56 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002317691.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1,  vacu 1  (predict for XP_002317691.1)
Subcellular
localization
TargetP
other 7,  scret 3  (predict for XP_002317691.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7485155

.
ppo-r.4
for
7485155

.
ppo-m.4
for
7485155

.
gma-u.5
for
100792582

.
gma-u.5
for
100775852

.
mtr-u.5
for
11425250

.
ath-u.5
for
SMU1

.
vvi-u.5
for
100241550

.
sly-u.5
for
544252

.
osa-u.5
for
4326991

.
zma-u.5
for
100381399

.


Ortholog ID: 9878
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol SMU1 LOC100792582 LOC100775852 LOC544252 LOC4326991 LOC100381399 LOC103831848 LOC100241550 LOC7485155 LOC11425250 LOC123069820 LOC123078294 LOC123443571 LOC107895089 LOC107920255 LOC106354299 LOC106406063 CHLRE_01g020400v5 LOC110433291 LOC102601072 LOC102630435 LOC100843153 LOC107793999 LOC107766919
Function* transducin family protein / WD-40 repeat family protein suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1 WD-40 repeat protein suppressor of mec-8 and unc-52 protein homolog 1 Suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1 uncharacterized protein suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1 suppressor of mec-8 and unc-52 protein homolog 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03082 ATP-dependent chromatin remodeling 2
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
ath04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly01240 Biosynthesis of cofactors 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03082 ATP-dependent chromatin remodeling 2
osa03013 Nucleocytoplasmic transport 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 6
bra03013 Nucleocytoplasmic transport 4
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03010 Ribosome 2
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03013 Nucleocytoplasmic transport 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 4
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 7
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03040 Spliceosome 7
tae03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03013 Nucleocytoplasmic transport 4
tae03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 4
ghi00270 Cysteine and methionine metabolism 2
ghi00450 Selenocompound metabolism 2
ghi00340 Histidine metabolism 2
ghi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 4
ghi03050 Proteasome 4
ghi00270 Cysteine and methionine metabolism 2
ghi00450 Selenocompound metabolism 2
ghi00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 8
sbi03018 RNA degradation 2
sbi03010 Ribosome 2
sbi00300 Lysine biosynthesis 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03018 RNA degradation 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843707 100792582 100775852 544252 4326991 100381399 103831848 100241550 7485155 11425250 123069820 123078294 123443571 107895089 107920255 106354299 106406063 5715193 110433291 102601072 102630435 100843153 107793999 107766919
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