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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7485528   coproporphyrinogen-III oxidase 1, chloroplastic 
 ppo-r.4   7485528   coproporphyrinogen-III oxidase 1, chloroplastic 
 gma-u.5   CPX   coproporphyrinogen oxidase 
 mtr-u.5   11425298   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 
 ath-u.5   LIN2   Coproporphyrinogen III oxidase 
 vvi-u.5   100243271   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 
 sly-u.5   101260673   coproporphyrinogen-III oxidase 1, chloroplastic 
 osa-u.5   4336951   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like 
 zma-u.5   100500945   necrotic4 

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Top 50 coexpressed genes to 7485528 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7485528 (ppo-u.5 coexpression data)

CoexMap"7485528"


ppoLOC7485528 | Entrez gene ID : 7485528    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00860 [list] [network] Porphyrin metabolism (65 genes)
pop01240 [list] [network] Biosynthesis of cofactors (298 genes)
GO BP
GO:0006782 [list] [network] protoporphyrinogen IX biosynthetic process  (1 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (136 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0004109 [list] [network] coproporphyrinogen oxidase activity  (2 genes)  IEA  
Protein XP_002317199.4 [sequence] [blastp]
XP_024436885.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002317199.4)
chlo 9  (predict for XP_024436885.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002317199.4)
chlo 9  (predict for XP_024436885.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7485528

.
ppo-r.4
for
7485528

.
gma-u.5
for
CPX

.
mtr-u.5
for
11425298

.
ath-u.5
for
LIN2

.
vvi-u.5
for
100243271

.
sly-u.5
for
101260673

.
osa-u.5
for
4336951

.
zma-u.5
for
100500945

.


Ortholog ID: 5897
Species ath gma sly osa zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol LIN2 CPX LOC101260673 LOC4336951 LOC100500945 LOC103843696 LOC103844502 LOC100243271 LOC7485528 LOC11425298 LOC123054338 LOC123144728 LOC123403778 LOC123427648 LOC107915439 LOC107950258 LOC106401564 LOC106423089 CHLRE_02g085450v5 LOC8085159 LOC8063950 LOC102595391 LOC102600601 LOC102614806 LOC100832294 LOC100830026 LOC107815524 LOC107766888
Function* Coproporphyrinogen III oxidase coproporphyrinogen oxidase coproporphyrinogen-III oxidase 1, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like necrotic4 coproporphyrinogen-III oxidase 1, chloroplastic coproporphyrinogen-III oxidase 1, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic coproporphyrinogen-III oxidase 1, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic coproporphyrinogen-III oxidase 1, chloroplastic-like coproporphyrinogen-III oxidase 1, chloroplastic uncharacterized protein oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like coproporphyrinogen-III oxidase 1, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 11
ath01240 Biosynthesis of cofactors 9
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 7
gma01240 Biosynthesis of cofactors 7
gma03060 Protein export 2
gma03010 Ribosome 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 7
sly01240 Biosynthesis of cofactors 7
sly03010 Ribosome 4
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa01240 Biosynthesis of cofactors 3
osa00970 Aminoacyl-tRNA biosynthesis 3
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
zma01230 Biosynthesis of amino acids 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 3
bra03040 Spliceosome 3
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 3
bra00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 3
bra03060 Protein export 2
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 2
ppo00290 Valine, leucine and isoleucine biosynthesis 2
ppo00770 Pantothenate and CoA biosynthesis 2
ppo01210 2-Oxocarboxylic acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 6
mtr01240 Biosynthesis of cofactors 6
mtr03010 Ribosome 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00710 Carbon fixation by Calvin cycle 2
tae01200 Carbon metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 5
tae01200 Carbon metabolism 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00710 Carbon fixation by Calvin cycle 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu00860 Porphyrin metabolism 4
hvu01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 5
ghi01240 Biosynthesis of cofactors 5
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi01240 Biosynthesis of cofactors 4
ghi00710 Carbon fixation by Calvin cycle 3
ghi01200 Carbon metabolism 3
ghi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 9
cre01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 7
sbi01240 Biosynthesis of cofactors 6
sbi00010 Glycolysis / Gluconeogenesis 5
sbi00071 Fatty acid degradation 2
sbi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 5
sot01240 Biosynthesis of cofactors 5
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 9
sot01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 3
cit01240 Biosynthesis of cofactors 3
cit03010 Ribosome 3
cit00010 Glycolysis / Gluconeogenesis 3
cit00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
bdi00860 Porphyrin metabolism 3
bdi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 5
nta00860 Porphyrin metabolism 4
nta00061 Fatty acid biosynthesis 2
nta00620 Pyruvate metabolism 2
nta00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
nta01240 Biosynthesis of cofactors 4
nta00260 Glycine, serine and threonine metabolism 3
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
nta01230 Biosynthesis of amino acids 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839489 100818277 101260673 4336951 100500945 103843696 103844502 100243271 7485528 11425298 123054338 123144728 123403778 123427648 107915439 107950258 106401564 106423089 5727381 8085159 8063950 102595391 102600601 102614806 100832294 100830026 107815524 107766888
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