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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7485682   methylsterol monooxygenase 2-2 
 ppo-r.4   7485682   methylsterol monooxygenase 2-2 
 ppo-u.5   18094413   methylsterol monooxygenase 1-1 
 ppo-u.5   7481517   methylsterol monooxygenase 2-2 
 gma-u.5   100790183   putative methylsterol monooxygenase DDB_G0269788-like 
 gma-u.5   100785755   methylsterol monooxygenase 1-1 
 gma-u.5   100816716   putative methylsterol monooxygenase DDB_G0269788-like 
 mtr-u.5   120575921   methylsterol monooxygenase 2-2 
 mtr-u.5   11407532   methylsterol monooxygenase 2-2 
 mtr-u.5   11410003   methylsterol monooxygenase 2-2 
 ath-u.5   SMO2-2   sterol 4-alpha-methyl-oxidase 2-2 
 ath-u.5   SMO1-1   sterol-4alpha-methyl oxidase 1-1 
 ath-u.5   SMO1-2   sterol C4-methyl oxidase 1-2 
 vvi-u.5   100242817   methylsterol monooxygenase 2-2 
 vvi-u.5   100255536   methylsterol monooxygenase 1-1 
 vvi-u.5   100260328   methylsterol monooxygenase 2-2 
 sly-u.5   100736533   sterol methyl oxidase 2 
 sly-u.5   SMO4   4-methylsterol oxidase 
 sly-u.5   SMO1   sterol methyl oxidase 1 
 osa-u.5   4351226   very-long-chain aldehyde decarbonylase GL1-11 
 osa-u.5   4349278   very-long-chain aldehyde decarbonylase GL1-10-like 
 osa-u.5   4331338   very-long-chain aldehyde decarbonylase GL1-10-like 
 zma-u.5   100282314   uncharacterized LOC100282314 
 zma-u.5   100285879   uncharacterized LOC100285879 
 zma-u.5   100281761   C-4 methylsterol oxidase 

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Top 50 coexpressed genes to 7485682 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7485682 (ppo-u.5 coexpression data)

CoexMap"7485682"


ppoLOC7485682 | Entrez gene ID : 7485682    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00100 [list] [network] Steroid biosynthesis (45 genes)
GO BP
GO:0080065 [list] [network] 4-alpha-methyl-delta7-sterol oxidation  (2 genes)  IEA  
GO:0016126 [list] [network] sterol biosynthetic process  (24 genes)  IEA  
GO CC
GO MF
GO:0000254 [list] [network] C-4 methylsterol oxidase activity  (5 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (388 genes)  IEA  
Protein XP_002298337.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  cyto_E.R. 4,  chlo 1,  nucl 1,  extr 1,  cysk 1,  cysk_nucl 1  (predict for XP_002298337.1)
Subcellular
localization
TargetP
scret 9,  other 4  (predict for XP_002298337.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7485682

.
ppo-r.4
for
7485682

.
ppo-u.5
for
18094413

.
ppo-u.5
for
7481517

.
gma-u.5
for
100790183

.
gma-u.5
for
100785755

.
gma-u.5
for
100816716

.
mtr-u.5
for
120575921

.
mtr-u.5
for
11407532

.
mtr-u.5
for
11410003

.
ath-u.5
for
SMO2-2

.
ath-u.5
for
SMO1-1

.
ath-u.5
for
SMO1-2

.
vvi-u.5
for
100242817

.
vvi-u.5
for
100255536

.
vvi-u.5
for
100260328

.
sly-u.5
for
100736533

.
sly-u.5
for
SMO4

.
sly-u.5
for
SMO1

.
osa-u.5
for
4351226

.
osa-u.5
for
4349278

.
osa-u.5
for
4331338

.
zma-u.5
for
100282314

.
zma-u.5
for
100285879

.
zma-u.5
for
100281761

.


Ortholog ID: 576
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae tae ghi ghi bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT4G22755 SMO2-2 LOC100793153 LOC100816716 LOC100736533 SMO4 LOC4331338 LOC4349278 LOC100217119 LOC542766 LOC103836444 LOC103860261 LOC100255536 LOC100242817 LOC18094413 LOC11426366 LOC11410003 LOC123181575 LOC123091749 LOC107934820 LOC107919482 LOC111208485 CHLRE_06g261200v5 LOC8062847 LOC8076673 LOC102606141 LOC102589817 LOC102610279 LOC102611328 LOC100832018 LOC100830254 LOC107803664 LOC107798822
Function* methylsterol monooxygenase 1-3 sterol 4-alpha-methyl-oxidase 2-2 probable S-acyltransferase At3g60800-like putative methylsterol monooxygenase DDB_G0269788-like sterol methyl oxidase 2 4-methylsterol oxidase very-long-chain aldehyde decarbonylase GL1-10-like very-long-chain aldehyde decarbonylase GL1-10-like uncharacterized LOC100217119 c-4 methylsterol oxidase methylsterol monooxygenase 2-2 methylsterol monooxygenase 1-3 methylsterol monooxygenase 1-1 methylsterol monooxygenase 2-2 methylsterol monooxygenase 1-1 methylsterol monooxygenase 1-1 methylsterol monooxygenase 2-2 very-long-chain aldehyde decarbonylase GL1-10 very-long-chain aldehyde decarbonylase GL1-11 methylsterol monooxygenase 2-2 methylsterol monooxygenase 1-2-like methylsterol monooxygenase 2-2-like uncharacterized protein methylsterol monooxygenase 1-1 methylsterol monooxygenase 1-2 methylsterol monooxygenase 1-1-like methylsterol monooxygenase 2-2-like methylsterol monooxygenase 1-2-like methylsterol monooxygenase 2-2 methylsterol monooxygenase 1-1 methylsterol monooxygenase 1-2 methylsterol monooxygenase 2-2 methylsterol monooxygenase 1-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 2
ath00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00100 Steroid biosynthesis 5
ath00900 Terpenoid backbone biosynthesis 3
ath00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00100 Steroid biosynthesis 6
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 4
sly00996 Biosynthesis of various alkaloids 2
sly00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00062 Fatty acid elongation 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00100 Steroid biosynthesis 3
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma04016 MAPK signaling pathway - plant 2
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 5
zma00100 Steroid biosynthesis 3
zma00510 N-Glycan biosynthesis 2
zma00513 Various types of N-glycan biosynthesis 2
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 3
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 3
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 3
tae00541 Biosynthesis of various nucleotide sugars 2
tae01250 Biosynthesis of nucleotide sugars 2
tae00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 4
ghi00940 Phenylpropanoid biosynthesis 3
ghi03013 Nucleocytoplasmic transport 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 8
bna00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00620 Pyruvate metabolism 7
cre01200 Carbon metabolism 7
cre00061 Fatty acid biosynthesis 4
cre01212 Fatty acid metabolism 4
cre00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 6
sbi04145 Phagosome 3
sbi00020 Citrate cycle (TCA cycle) 3
sbi01200 Carbon metabolism 3
sbi00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00100 Steroid biosynthesis 5
sot00996 Biosynthesis of various alkaloids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00996 Biosynthesis of various alkaloids 3
sot00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04517 IgSF CAM signaling 2
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00460 Cyanoamino acid metabolism 3
bdi00500 Starch and sucrose metabolism 3
bdi00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta00100 Steroid biosynthesis 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00620 Pyruvate metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 2
nta00100 Steroid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 28720173 817488 100793153 100816716 100736533 101258266 4331338 4349278 100217119 542766 103836444 103860261 100255536 100242817 18094413 11426366 11410003 123181575 123091749 107934820 107919482 111208485 5722033 8062847 8076673 102606141 102589817 102610279 102611328 100832018 100830254 107803664 107798822
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