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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7485725   uncharacterized LOC7485725 
 ppo-r.4   7485725   uncharacterized LOC7485725 
 ppo-m.4   7485725   uncharacterized LOC7485725 
 gma-u.5   100527607   protein-tyrosine phosphatase-like 
 mtr-u.5   11406472   very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 
 ath-u.5   AT5G59770   Protein-tyrosine phosphatase-like, PTPLA 
 vvi-u.5   100255240   uncharacterized LOC100255240 
 sly-u.5   101262991   uncharacterized LOC101262991 
 osa-u.5   4339019   uncharacterized LOC4339019 
 zma-u.5   100284318   uncharacterized LOC100284318 

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Top 50 coexpressed genes to 7485725 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7485725 (ppo-u.5 coexpression data)

CoexMap"7485725"


ppoLOC7485725 | Entrez gene ID : 7485725    
Species ppo gma mtr ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00062 [list] [network] Fatty acid elongation (43 genes)
pop01040 [list] [network] Biosynthesis of unsaturated fatty acids (31 genes)
pop01212 [list] [network] Fatty acid metabolism (95 genes)
GO BP
GO:0030497 [list] [network] fatty acid elongation  (8 genes)  IEA  
GO:0042761 [list] [network] very long-chain fatty acid biosynthetic process  (8 genes)  IEA  
GO:0030148 [list] [network] sphingolipid biosynthetic process  (31 genes)  IEA  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (280 genes)  IEA  
GO MF
GO:0018812 [list] [network] 3-hydroxyacyl-CoA dehydratase activity  (2 genes)  IEA  
Protein XP_024452635.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  cyto 1,  golg 1,  chlo 1,  mito 1,  plas 1,  vacu 1,  cyto_nucl 1,  chlo_mito 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_024452635.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_024452635.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7485725

.
ppo-r.4
for
7485725

.
ppo-m.4
for
7485725

.
gma-u.5
for
100527607

.
mtr-u.5
for
11406472

.
ath-u.5
for
AT5G59770

.
vvi-u.5
for
100255240

.
sly-u.5
for
101262991

.
osa-u.5
for
4339019

.
zma-u.5
for
100284318

.


Ortholog ID: 10410
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G59770 LOC100527607 LOC101262991 LOC4339019 LOC100284318 LOC103851552 LOC100255240 LOC7485725 LOC11406472 LOC123136094 LOC123093603 LOC123445381 LOC107963934 LOC107950284 LOC106385553 LOC106441127 CHLRE_08g363500v5 LOC8061772 LOC102586361 LOC102621321 LOC100840117 LOC107803408 LOC107779652
Function* Protein-tyrosine phosphatase-like, PTPLA protein-tyrosine phosphatase-like uncharacterized LOC101262991 uncharacterized LOC4339019 uncharacterized LOC100284318 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 uncharacterized LOC100255240 uncharacterized LOC7485725 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2-like very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2-like very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2-like uncharacterized protein very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 uncharacterized LOC102621321 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 uncharacterized LOC107803408 uncharacterized LOC107779652
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
gma03010 Ribosome 2
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 4
osa00500 Starch and sucrose metabolism 2
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
bra00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 8
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 6
ppo03010 Ribosome 2
ppo00195 Photosynthesis 2
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ppo00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 2
mtr04070 Phosphatidylinositol signaling system 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 10
tae01200 Carbon metabolism 10
tae00620 Pyruvate metabolism 9
tae01212 Fatty acid metabolism 9
tae00020 Citrate cycle (TCA cycle) 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 6
tae01200 Carbon metabolism 6
tae00620 Pyruvate metabolism 5
tae01212 Fatty acid metabolism 5
tae00062 Fatty acid elongation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi00062 Fatty acid elongation 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
ghi01212 Fatty acid metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi00062 Fatty acid elongation 2
ghi01040 Biosynthesis of unsaturated fatty acids 2
ghi01212 Fatty acid metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna00906 Carotenoid biosynthesis 2
bna00062 Fatty acid elongation 2
bna01040 Biosynthesis of unsaturated fatty acids 2
bna01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna00906 Carotenoid biosynthesis 2
bna00062 Fatty acid elongation 2
bna01040 Biosynthesis of unsaturated fatty acids 2
bna01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00510 N-Glycan biosynthesis 4
cre00513 Various types of N-glycan biosynthesis 4
cre04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
nta00062 Fatty acid elongation 2
nta01040 Biosynthesis of unsaturated fatty acids 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00062 Fatty acid elongation 2
nta01040 Biosynthesis of unsaturated fatty acids 2
nta01212 Fatty acid metabolism 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836098 100527607 101262991 4339019 100284318 103851552 100255240 7485725 11406472 123136094 123093603 123445381 107963934 107950284 106385553 106441127 5721618 8061772 102586361 102621321 100840117 107803408 107779652
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