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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7486501   probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial 
 ppo-r.4   7486501   probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial 
 ppo-m.4   7486501   probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial 
 gma-u.5   100809456   probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial 
 gma-u.5   100777469   probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial 
 mtr-u.5   11420784   probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial 
 ath-u.5   KDTA   KDO transferase A 
 vvi-u.5   100247609   probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial 
 sly-u.5   101265184   probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial 
 osa-u.5   9266107   probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial 
 zma-u.5   103644087   cell number regulator 13-like 
 zma-u.5   103644086   cell number regulator 13-like 
 zma-u.5   103627897   cell number regulator 13-like 

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Top 50 coexpressed genes to 7486501 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7486501 (ppo-u.5 coexpression data)

CoexMap"7486501"


ppoLOC7486501 | Entrez gene ID : 7486501    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 2 1 1 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00540 [list] [network] Lipopolysaccharide biosynthesis (6 genes)
GO BP
GO:0009245 [list] [network] lipid A biosynthetic process  (5 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (1125 genes)  IEA  
GO MF
GO:0016740 [list] [network] transferase activity  (4072 genes)  IEA  
Protein XP_002322900.2 [sequence] [blastp]
XP_024442910.1 [sequence] [blastp]
XP_024442911.1 [sequence] [blastp]
XP_024442912.1 [sequence] [blastp]
XP_024442913.1 [sequence] [blastp]
XP_024442914.1 [sequence] [blastp]
XP_052304131.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo_mito 4,  chlo 3,  plas 1  (predict for XP_002322900.2)
mito 4,  chlo_mito 4,  chlo 3,  plas 1  (predict for XP_024442910.1)
mito 4,  chlo_mito 4,  chlo 3,  plas 1,  vacu 1,  E.R. 1,  nucl_plas 1,  golg_plas 1,  E.R._vacu 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_024442911.1)
mito 4,  chlo_mito 4,  chlo 3,  plas 1,  vacu 1,  E.R. 1,  nucl_plas 1,  golg_plas 1,  E.R._vacu 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_024442912.1)
mito 4,  chlo_mito 4,  chlo 3,  plas 1,  vacu 1,  E.R. 1,  nucl_plas 1,  golg_plas 1,  E.R._vacu 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_024442913.1)
mito 4,  chlo_mito 4,  chlo 3,  plas 1,  vacu 1,  E.R. 1,  nucl_plas 1,  golg_plas 1,  E.R._vacu 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_024442914.1)
mito 4,  chlo_mito 4,  chlo 3,  plas 1  (predict for XP_052304131.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_002322900.2)
mito 8  (predict for XP_024442910.1)
mito 8  (predict for XP_024442911.1)
mito 8  (predict for XP_024442912.1)
mito 8  (predict for XP_024442913.1)
mito 8  (predict for XP_024442914.1)
mito 8  (predict for XP_052304131.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7486501

.
ppo-r.4
for
7486501

.
ppo-m.4
for
7486501

.
gma-u.5
for
100809456

.
gma-u.5
for
100777469

.
mtr-u.5
for
11420784

.
ath-u.5
for
KDTA

.
vvi-u.5
for
100247609

.
sly-u.5
for
101265184

.
osa-u.5
for
9266107

.
zma-u.5
for
103644087

.
zma-u.5
for
103644086

.
zma-u.5
for
103627897

.


Ortholog ID: 8145
Species ath gma gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol KDTA LOC100809456 LOC100777469 LOC101265184 LOC9266107 LOC103627897 LOC100384169 LOC103847360 LOC100247609 LOC7486501 LOC11420784 LOC123062652 LOC123079809 LOC123444853 LOC107948393 LOC107899520 LOC106433837 LOC106372654 CHLRE_13g583100v5 LOC8058936 LOC102593521 LOC102618254 LOC100836321 LOC107781547 LOC107801790
Function* KDO transferase A probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial cell number regulator 13-like putative 3-deoxy-D-manno-octulosonic acid transferase mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial uncharacterized protein probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial putative 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial putative 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
gma03022 Basal transcription factors 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00562 Inositol phosphate metabolism 2
zma04070 Phosphatidylinositol signaling system 2
zma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00540 Lipopolysaccharide biosynthesis 3
tae00760 Nicotinate and nicotinamide metabolism 2
tae01240 Biosynthesis of cofactors 2
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00540 Lipopolysaccharide biosynthesis 3
tae00760 Nicotinate and nicotinamide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00440 Phosphonate and phosphinate metabolism 3
ghi00564 Glycerophospholipid metabolism 3
ghi00565 Ether lipid metabolism 3
ghi00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 2
ghi00440 Phosphonate and phosphinate metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04120 Ubiquitin mediated proteolysis 4
bna03013 Nucleocytoplasmic transport 2
bna03082 ATP-dependent chromatin remodeling 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04120 Ubiquitin mediated proteolysis 4
bna03082 ATP-dependent chromatin remodeling 3
bna03013 Nucleocytoplasmic transport 2
bna04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot00260 Glycine, serine and threonine metabolism 2
sot00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 6
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01250 Biosynthesis of nucleotide sugars 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831727 100809456 100777469 101265184 9266107 103627897 100384169 103847360 100247609 7486501 11420784 123062652 123079809 123444853 107948393 107899520 106433837 106372654 66056017 8058936 102593521 102618254 100836321 107781547 107801790
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