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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7487130   uncharacterized LOC7487130 
 ppo-r.4   7487130   uncharacterized LOC7487130 
 ppo-m.4   7487130   uncharacterized LOC7487130 
 gma-u.5   100788690   DNA annealing helicase and endonuclease ZRANB3 
 mtr-u.5   120579634   DNA annealing helicase and endonuclease ZRANB3 
 ath-u.5   AT5G07810   SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein 
 vvi-u.5   100267344   uncharacterized LOC100267344 
 sly-u.5   101263803   uncharacterized LOC101263803 
 osa-u.5   4343803   uncharacterized LOC4343803 
 zma-u.5   100277497   uncharacterized LOC100277497 

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Top 50 coexpressed genes to 7487130 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7487130 (ppo-u.5 coexpression data)

CoexMap"7487130"


ppoLOC7487130 | Entrez gene ID : 7487130    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031297 [list] [network] replication fork processing  (11 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (290 genes)  IEA  
GO CC
GO:0043596 [list] [network] nuclear replication fork  (24 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (53 genes)  IEA  
GO:0004519 [list] [network] endonuclease activity  (140 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4002 genes)  IEA  
Protein XP_024438590.1 [sequence] [blastp]
XP_024438592.1 [sequence] [blastp]
XP_052302024.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 2,  vacu 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_024438590.1)
nucl 4,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_024438592.1)
nucl 4,  cyto 2,  E.R. 1,  cyto_plas 1  (predict for XP_052302024.1)
Subcellular
localization
TargetP
other 3,  mito 3  (predict for XP_024438590.1)
other 3,  mito 3  (predict for XP_024438592.1)
other 3,  mito 3  (predict for XP_052302024.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7487130

.
ppo-r.4
for
7487130

.
ppo-m.4
for
7487130

.
gma-u.5
for
100788690

.
mtr-u.5
for
120579634

.
ath-u.5
for
AT5G07810

.
vvi-u.5
for
100267344

.
sly-u.5
for
101263803

.
osa-u.5
for
4343803

.
zma-u.5
for
100277497

.


Ortholog ID: 11398
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sot cit bdi nta nta
Symbol AT5G07810 LOC100788690 LOC101263803 LOC4343803 LOC100277497 LOC103855745 LOC100267344 LOC7487130 LOC120579634 LOC123188058 LOC123052193 LOC123425439 LOC107887837 LOC107949799 LOC106384999 LOC106385009 LOC102603029 LOC102611082 LOC100832506 LOC107811423 LOC107787482
Function* SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein DNA annealing helicase and endonuclease ZRANB3 uncharacterized LOC101263803 uncharacterized LOC4343803 uncharacterized LOC100277497 DNA annealing helicase and endonuclease ZRANB3 uncharacterized LOC100267344 uncharacterized LOC7487130 DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3 DNA annealing helicase and endonuclease ZRANB3 uncharacterized LOC102611082 DNA annealing helicase and endonuclease ZRANB3 uncharacterized LOC107811423 uncharacterized LOC107787482
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 3
osa03410 Base excision repair 2
osa03430 Mismatch repair 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 4
vvi03440 Homologous recombination 3
vvi03410 Base excision repair 2
vvi03420 Nucleotide excision repair 2
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 4
nta04120 Ubiquitin mediated proteolysis 2
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
nta04814 Motor proteins 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830674 100788690 101263803 4343803 100277497 103855745 100267344 7487130 120579634 123188058 123052193 123425439 107887837 107949799 106384999 106385009 102603029 102611082 100832506 107811423 107787482
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