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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7487367   ATP-dependent Clp protease proteolytic subunit 3, chloroplastic 
 ppo-r.4   7487367   ATP-dependent Clp protease proteolytic subunit 3, chloroplastic 
 ppo-m.4   7487367   ATP-dependent Clp protease proteolytic subunit 3, chloroplastic 
 gma-u.5   100795295   ATP-dependent Clp protease proteolytic subunit 3, chloroplastic 
 gma-u.5   100778609   ATP-dependent Clp protease proteolytic subunit 3, chloroplastic 
 mtr-u.5   11436233   ATP-dependent Clp protease proteolytic subunit 3, chloroplastic 
 ath-u.5   CLPP3   CLP protease proteolytic subunit 3 
 vvi-u.5   100265683   ATP-dependent Clp protease proteolytic subunit 3, chloroplastic 
 sly-u.5   101261866   ATP-dependent Clp protease proteolytic subunit 3, chloroplastic 
 osa-u.5   4324049   ATP-dependent Clp protease proteolytic subunit 3, chloroplastic 
 zma-u.5   100282832   ATP-dependent Clp protease proteolytic subunit 1 

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Top 50 coexpressed genes to 7487367 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7487367 (ppo-u.5 coexpression data)

CoexMap"7487367"


ppoLOC7487367 | Entrez gene ID : 7487367    
Species ppo gma mtr ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006515 [list] [network] protein quality control for misfolded or incompletely synthesized proteins  (20 genes)  IEA  
GO CC
GO:0009368 [list] [network] endopeptidase Clp complex  (14 genes)  IEA  
GO MF
GO:0051117 [list] [network] ATPase binding  (20 genes)  IEA  
GO:0004176 [list] [network] ATP-dependent peptidase activity  (40 genes)  IEA  
GO:0004252 [list] [network] serine-type endopeptidase activity  (144 genes)  IEA  
Protein XP_002305856.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002305856.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_002305856.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7487367

.
ppo-r.4
for
7487367

.
ppo-m.4
for
7487367

.
gma-u.5
for
100795295

.
gma-u.5
for
100778609

.
mtr-u.5
for
11436233

.
ath-u.5
for
CLPP3

.
vvi-u.5
for
100265683

.
sly-u.5
for
101261866

.
osa-u.5
for
4324049

.
zma-u.5
for
100282832

.


Ortholog ID: 11110
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CLPP3 LOC100778609 LOC100795295 LOC101261866 LOC4324049 LOC100282832 LOC103831118 LOC100265683 LOC7487367 LOC11436233 LOC123078301 LOC123069877 LOC123443629 LOC107953925 LOC107936630 LOC106348577 LOC106353888 LOC8069569 LOC102600187 LOC102613764 LOC100828490 LOC107831176 LOC107777950
Function* CLP protease proteolytic subunit 3 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic ATP-dependent Clp protease proteolytic subunit 3, chloroplastic-like ATP-dependent Clp protease proteolytic subunit 3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
vvi00620 Pyruvate metabolism 2
vvi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00450 Selenocompound metabolism 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00450 Selenocompound metabolism 2
ghi00053 Ascorbate and aldarate metabolism 2
ghi00480 Glutathione metabolism 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00030 Pentose phosphate pathway 2
bna00230 Purine metabolism 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00030 Pentose phosphate pathway 2
bna00230 Purine metabolism 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 5
sbi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 5
bdi01240 Biosynthesis of cofactors 3
bdi00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842985 100778609 100795295 101261866 4324049 100282832 103831118 100265683 7487367 11436233 123078301 123069877 123443629 107953925 107936630 106348577 106353888 8069569 102600187 102613764 100828490 107831176 107777950
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