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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7488883   uncharacterized LOC7488883 
 ppo-r.4   7488883   uncharacterized LOC7488883 
 ppo-m.4   7488883   uncharacterized LOC7488883 
 mtr-u.5   25491692   uncharacterized LOC25491692 
 ath-u.5   MEE44   Nucleotidyltransferase family protein 
 vvi-u.5   100265029   uncharacterized LOC100265029 
 sly-u.5   101252827   uncharacterized LOC101252827 
 osa-u.5   9268159   uncharacterized LOC9268159 
 zma-u.5   100278145   uncharacterized LOC100278145 

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Top 50 coexpressed genes to 7488883 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7488883 (ppo-u.5 coexpression data)

CoexMap"7488883"


ppoLOC7488883 | Entrez gene ID : 7488883    
Species ppo mtr ath vvi sly osa zma tae hvu ghi bdi cit gma bra cre sbi bna nta sot
Paralog 3 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031123 [list] [network] RNA 3'-end processing  (49 genes)  IEA  
GO CC
GO:0031499 [list] [network] TRAMP complex  (2 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (220 genes)  IEA  
GO MF
GO:1990817 [list] [network] poly(A) RNA polymerase activity  (6 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (348 genes)  IEA  
Protein XP_024439997.2 [sequence] [blastp]
XP_052302768.1 [sequence] [blastp]
XP_052302769.1 [sequence] [blastp]
XP_052302770.1 [sequence] [blastp]
XP_052302771.1 [sequence] [blastp]
XP_052302772.1 [sequence] [blastp]
XP_052302773.1 [sequence] [blastp]
XP_052302774.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_024439997.2)
chlo 9  (predict for XP_052302768.1)
chlo 9  (predict for XP_052302769.1)
chlo 9  (predict for XP_052302770.1)
chlo 9  (predict for XP_052302771.1)
chlo 9  (predict for XP_052302772.1)
nucl 9  (predict for XP_052302773.1)
nucl 9  (predict for XP_052302774.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_024439997.2)
chlo 6  (predict for XP_052302768.1)
chlo 6  (predict for XP_052302769.1)
chlo 6  (predict for XP_052302770.1)
chlo 6  (predict for XP_052302771.1)
chlo 6  (predict for XP_052302772.1)
other 9  (predict for XP_052302773.1)
other 9  (predict for XP_052302774.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7488883

.
ppo-r.4
for
7488883

.
ppo-m.4
for
7488883

.
mtr-u.5
for
25491692

.
ath-u.5
for
MEE44

.
vvi-u.5
for
100265029

.
sly-u.5
for
101252827

.
osa-u.5
for
9268159

.
zma-u.5
for
100278145

.


Ortholog ID: 11715
Species ath sly osa zma bra vvi ppo mtr tae tae hvu ghi bna bna sbi sot cit bdi nta nta
Symbol MEE44 LOC101252827 LOC9268159 LOC100278145 LOC103858376 LOC100265029 LOC7488883 LOC25491692 LOC123164750 LOC123149150 LOC123412906 LOC107911602 LOC106438861 LOC106438382 LOC8083186 LOC102580618 LOC102608196 LOC100844132 LOC107762184 LOC107791440
Function* Nucleotidyltransferase family protein uncharacterized LOC101252827 uncharacterized LOC9268159 uncharacterized LOC100278145 uncharacterized LOC103858376 uncharacterized LOC100265029 uncharacterized LOC7488883 uncharacterized LOC25491692 uncharacterized LOC123164750 uncharacterized LOC123149150 uncharacterized LOC123412906 uncharacterized LOC107911602 uncharacterized LOC106438861 uncharacterized LOC106438382 uncharacterized LOC8083186 uncharacterized LOC102580618 uncharacterized LOC102608196 uncharacterized LOC100844132 uncharacterized LOC107762184 uncharacterized LOC107791440
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 4
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae00310 Lysine degradation 3
tae03083 Polycomb repressive complex 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
tae03013 Nucleocytoplasmic transport 3
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 6
ghi03250 Viral life cycle - HIV-1 6
ghi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta03250 Viral life cycle - HIV-1 4
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 3
nta03250 Viral life cycle - HIV-1 3
nta04141 Protein processing in endoplasmic reticulum 2
nta00310 Lysine degradation 2
nta00562 Inositol phosphate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828214 101252827 9268159 100278145 103858376 100265029 7488883 25491692 123164750 123149150 123412906 107911602 106438861 106438382 8083186 102580618 102608196 100844132 107762184 107791440
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