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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7488947   probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial 
 ppo-r.4   7488947   probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial 
 ppo-m.4   7488947   probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial 
 gma-u.5   100784239   probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial 
 gma-u.5   100782678   probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial 
 mtr-u.5   11412195   probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial 
 ath-u.5   AT4G29120   6-phosphogluconate dehydrogenase family protein 
 vvi-u.5   100264642   probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial 
 sly-u.5   101245206   probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial 
 osa-u.5   4326545   probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial 
 zma-u.5   100277507   uncharacterized LOC100277507 

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Top 50 coexpressed genes to 7488947 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7488947 (ppo-u.5 coexpression data)

CoexMap"7488947"


ppoLOC7488947 | Entrez gene ID : 7488947    
Species ppo gma mtr ath vvi sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00280 [list] [network] Valine, leucine and isoleucine degradation (65 genes)
GO BP
GO CC
GO MF
GO:0050661 [list] [network] NADP binding  (72 genes)  IEA  
GO:0051287 [list] [network] NAD binding  (105 genes)  IEA  
GO:0016491 [list] [network] oxidoreductase activity  (1602 genes)  IEA  
Protein XP_002324452.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002324452.2)
Subcellular
localization
TargetP
mito 6  (predict for XP_002324452.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7488947

.
ppo-r.4
for
7488947

.
ppo-m.4
for
7488947

.
gma-u.5
for
100784239

.
gma-u.5
for
100782678

.
mtr-u.5
for
11412195

.
ath-u.5
for
AT4G29120

.
vvi-u.5
for
100264642

.
sly-u.5
for
101245206

.
osa-u.5
for
4326545

.
zma-u.5
for
100277507

.


Ortholog ID: 10887
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT4G29120 LOC100782678 LOC100784239 LOC101245206 LOC4326545 LOC100277507 LOC103871509 LOC100264642 LOC7488947 LOC11412195 LOC123079063 LOC123070649 LOC123444373 LOC107962719 LOC107901167 LOC111207194 LOC106346396 LOC8075553 LOC102592544 LOC102628527 LOC100824695 LOC107808859 LOC107797409
Function* 6-phosphogluconate dehydrogenase family protein probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial uncharacterized LOC100277507 probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial putative 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial putative 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00750 Vitamin B6 metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra03083 Polycomb repressive complex 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00510 N-Glycan biosynthesis 2
vvi00513 Various types of N-glycan biosynthesis 2
vvi04141 Protein processing in endoplasmic reticulum 2
vvi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00290 Valine, leucine and isoleucine biosynthesis 3
ppo01210 2-Oxocarboxylic acid metabolism 3
ppo01230 Biosynthesis of amino acids 3
ppo00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 5
mtr00270 Cysteine and methionine metabolism 3
mtr01200 Carbon metabolism 3
mtr00543 Exopolysaccharide biosynthesis 2
mtr00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
tae00280 Valine, leucine and isoleucine degradation 3
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
tae00280 Valine, leucine and isoleucine degradation 3
tae00270 Cysteine and methionine metabolism 3
tae00543 Exopolysaccharide biosynthesis 3
tae00920 Sulfur metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
ghi03083 Polycomb repressive complex 3
ghi00052 Galactose metabolism 2
ghi00500 Starch and sucrose metabolism 2
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
ghi03083 Polycomb repressive complex 3
ghi00052 Galactose metabolism 2
ghi00500 Starch and sucrose metabolism 2
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00062 Fatty acid elongation 2
sot01040 Biosynthesis of unsaturated fatty acids 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta00280 Valine, leucine and isoleucine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829033 100782678 100784239 101245206 4326545 100277507 103871509 100264642 7488947 11412195 123079063 123070649 123444373 107962719 107901167 111207194 106346396 8075553 102592544 102628527 100824695 107808859 107797409
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