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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5  7488995  ADP-ribosylation factor 1 
 ppo-r.4  7488995  ADP-ribosylation factor 1 
 ppo-u.5  7459901  ADP-ribosylation factor 1 
 ppo-u.5  7476225  ADP-ribosylation factor 1 
 ppo-u.5  18100535  ADP-ribosylation factor 1 
 gma-u.5  100815426  ADP-ribosylation factor 1 
 gma-u.5  100805153  ADP-ribosylation factor 1-like 
 mtr-u.5  11428372  ADP-ribosylation factor 1 
 ath-u.5  ARF3  ADP-ribosylation factor 3 
 vvi-u.5  100241677  ADP-ribosylation factor 1 
 vvi-u.5  100249651  ADP-ribosylation factor 1 
 sly-u.5  101266344  ADP-ribosylation factor 1 
 osa-u.5  4345072  ADP-ribosylation factor 3 
 zma-u.5  100191298  uncharacterized LOC100191298 

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Top 50 coexpressed genes to 7488995 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7488995 (ppo-u.5 coexpression data)

CoexMap"7488995"


ppoLOC7488995 | Entrez gene ID : 7488995
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006886 [list] [network] intracellular protein transport  (350 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (540 genes)  IEA  
GO CC
GO:0005794 [list] [network] Golgi apparatus  (593 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (264 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (290 genes)  IEA  
Protein XP_052305155.1 [sequence] [blastp]
XP_052305156.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto_nucl 5,  cyto 4,  cyto_E.R. 3,  nucl 2,  cysk_nucl 1,  chlo 1  (predict for XP_052305155.1)
cyto_nucl 5,  cyto 4,  cyto_E.R. 3,  nucl 2,  cysk_nucl 1,  chlo 1  (predict for XP_052305156.1)
Subcellular
localization
TargetP
scret 6,  other 5  (predict for XP_052305155.1)
scret 6,  other 5  (predict for XP_052305156.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ppo-u.5
for
7488995

.

ppo-r.4
for
7488995

.

ppo-u.5
for
7459901

.

ppo-u.5
for
7476225

.

ppo-u.5
for
18100535

.

gma-u.5
for
100815426

.

gma-u.5
for
100805153

.

mtr-u.5
for
11428372

.

ath-u.5
for
ARF3

.

vvi-u.5
for
100241677

.

vvi-u.5
for
100249651

.

sly-u.5
for
101266344

.

osa-u.5
for
4345072

.

zma-u.5
for
100191298

.


Ortholog ID: 4871
Species ath gma gma sly osa zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit cit bdi nta nta
Symbol ARF3 LOC100805153 LOC100815426 LOC101266344 LOC4345072 LOC100191298 LOC103864586 LOC103851569 LOC100241677 LOC100249651 LOC7476225 LOC18100535 LOC11428372 LOC123170069 LOC123154214 LOC123407043 LOC107909202 LOC107937899 LOC106391079 LOC106354741 CHLRE_12g535900v5 LOC8067937 LOC102582483 LOC102610299 LOC102621374 LOC100825312 LOC107803723 LOC107761870
Function* ADP-ribosylation factor 3 ADP-ribosylation factor 1-like ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 3 uncharacterized LOC100191298 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 3 ADP-ribosylation factor 3 ADP-ribosylation factor 3 ADP-ribosylation factor 1 ADP-ribosylation factor 3 ADP-ribosylation factor 1 ADP-ribosylation factor 1-like uncharacterized protein ADP-ribosylation factor 3 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 3 ADP-ribosylation factor 1 ADP-ribosylation factor 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
ath04141 Protein processing in endoplasmic reticulum 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00510 N-Glycan biosynthesis 3
sly00513 Various types of N-glycan biosynthesis 3
sly04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra03018 RNA degradation 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 3
ppo04144 Endocytosis 2
ppo04145 Phagosome 2
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 3
ppo04120 Ubiquitin mediated proteolysis 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 7
mtr04517 IgSF CAM signaling 7
mtr04814 Motor proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 8
bna04144 Endocytosis 3
bna04517 IgSF CAM signaling 3
bna05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 4
cre04145 Phagosome 4
cre04141 Protein processing in endoplasmic reticulum 2
cre04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00562 Inositol phosphate metabolism 2
sbi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
sot00510 N-Glycan biosynthesis 2
sot00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 4
cit04130 SNARE interactions in vesicular transport 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 5
bdi04142 Lysosome 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
nta04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817014 100805153 100815426 101266344 4345072 100191298 103864586 103851569 100241677 100249651 7476225 18100535 11428372 123170069 123154214 123407043 107909202 107937899 106391079 106354741 5718492 8067937 102582483 102610299 102621374 100825312 107803723 107761870
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