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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7489385   tRNA(adenine(34)) deaminase, chloroplastic 
 ppo-r.4   7489385   tRNA(adenine(34)) deaminase, chloroplastic 
 ppo-u.5   7483904   tRNA(adenine(34)) deaminase, chloroplastic 
 gma-u.5   100795980   tRNA(adenine(34)) deaminase, chloroplastic 
 gma-u.5   100788560   tRNA(adenine(34)) deaminase, chloroplastic 
 mtr-u.5   120575839   tRNA(adenine(34)) deaminase, chloroplastic 
 mtr-u.5   120578154   tRNA(adenine(34)) deaminase, chloroplastic-like 
 mtr-u.5   120580921   tRNA(adenine(34)) deaminase, chloroplastic-like 
 ath-u.5   TADA   tRNA arginine adenosine deaminase 
 vvi-u.5   100259373   tRNA(adenine(34)) deaminase, chloroplastic 
 sly-u.5   101249267   tRNA(adenine(34)) deaminase, chloroplastic 
 osa-u.5   4341078   tRNA(adenine(34)) deaminase, chloroplastic 
 zma-u.5   103638369   tRNA(adenine(34)) deaminase, chloroplastic 

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Top 50 coexpressed genes to 7489385 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7489385 (ppo-u.5 coexpression data)

CoexMap"7489385"


ppoLOC7489385 | Entrez gene ID : 7489385    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0002100 [list] [network] tRNA wobble adenosine to inosine editing  (4 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (718 genes)  IEA  
GO MF
GO:0008251 [list] [network] tRNA-specific adenosine deaminase activity  (5 genes)  IEA  
Protein XP_024466604.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_024466604.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_024466604.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7489385

.
ppo-r.4
for
7489385

.
ppo-u.5
for
7483904

.
gma-u.5
for
100795980

.
gma-u.5
for
100788560

.
mtr-u.5
for
120575839

.
mtr-u.5
for
120578154

.
mtr-u.5
for
120580921

.
ath-u.5
for
TADA

.
vvi-u.5
for
100259373

.
sly-u.5
for
101249267

.
osa-u.5
for
4341078

.
zma-u.5
for
103638369

.


Ortholog ID: 8299
Species ath gma gma sly osa zma bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol TADA LOC100795980 LOC100788560 LOC101249267 LOC4341078 LOC103638369 LOC103852517 LOC100259373 LOC7483904 LOC7489385 LOC120580921 LOC120575839 LOC123158068 LOC123168073 LOC123411743 LOC107938243 LOC107946473 LOC106393302 LOC106440162 CHLRE_13g573300v5 LOC8078299 LOC102593353 LOC102613873 LOC100831414 LOC107802134 LOC107800035
Function* tRNA arginine adenosine deaminase tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic-like tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic-like tRNA(adenine(34)) deaminase, chloroplastic uncharacterized protein tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic tRNA(adenine(34)) deaminase, chloroplastic uncharacterized LOC107800035
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 3
nta00270 Cysteine and methionine metabolism 2
nta04148 Efferocytosis 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 3
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843202 100795980 100788560 101249267 4341078 103638369 103852517 100259373 7483904 7489385 120580921 120575839 123158068 123168073 123411743 107938243 107946473 106393302 106440162 5719182 8078299 102593353 102613873 100831414 107802134 107800035
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