ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7475619	uncharacterized LOC7475619
ppo-u.5	7483927	uncharacterized LOC7483927
ppo-u.5	7487091	uncharacterized LOC7487091
gma-u.5	113000756	uncharacterized LOC113000756
gma-u.5	100794581	uncharacterized LOC100794581
gma-u.5	100791390	uncharacterized LOC100791390
mtr-u.5	11418389	uncharacterized LOC11418389
mtr-u.5	25493937	uncharacterized LOC25493937
ath-u.5	AT1G18470	Transmembrane Fragile-X-F-associated protein
ath-u.5	AT1G68820	Transmembrane Fragile-X-F-associated protein
ath-u.5	AT1G73950	Transmembrane Fragile-X-F-associated protein
bra-r.6	103831868	uncharacterized LOC103831868
bra-r.6	103835905	uncharacterized LOC103835905
bra-r.6	103842699	uncharacterized LOC103842699
vvi-u.5	100256061	uncharacterized LOC100256061
vvi-u.5	100249082	uncharacterized LOC100249082
ghi-r.1	121217708	uncharacterized LOC121217708
ghi-r.1	107892097	uncharacterized LOC107892097
ghi-r.1	107894160	uncharacterized LOC107894160
bna-r.1	106361996	uncharacterized LOC106361996
bna-r.1	BNAC06G29610D	uncharacterized BNAC06G29610D
bna-r.1	111210412	uncharacterized LOC111210412
cit-r.1	102614956	uncharacterized LOC102614956
cit-r.1	102621132	uncharacterized LOC102621132
sly-u.5	101259324	uncharacterized LOC101259324
sly-u.5	101266509	uncharacterized LOC101266509
sot-r.1	102605582	uncharacterized LOC102605582
sot-r.1	102582701	uncharacterized LOC102582701
nta-r.1	107824519	uncharacterized LOC107824519
nta-r.1	107815502	uncharacterized LOC107815502
nta-r.1	107761150	uncharacterized LOC107761150
osa-u.5	4333857	uncharacterized LOC4333857
osa-u.5	4347030	uncharacterized LOC4347030
zma-u.5	100279431	putative RING zinc finger domain superfamily protein
zma-u.5	100282654	protein binding protein
zma-u.5	100280299	putative RING zinc finger domain superfamily protein
tae-r.2	123087140	uncharacterized LOC123087140
tae-r.2	123121492	uncharacterized LOC123121492
tae-r.2	123103715	uncharacterized LOC123103715
hvu-r.1	123396502	uncharacterized LOC123396502
hvu-r.1	123447396	uncharacterized LOC123447396
sbi-r.1	8055809	uncharacterized LOC8055809
sbi-r.1	8063404	uncharacterized LOC8063404
bdi-r.1	100846770	uncharacterized LOC100846770
bdi-r.1	100822157	uncharacterized LOC100822157
cre-r.1	CHLRE_02g110000v5	uncharacterized protein

Top 50 coexpressed genes to 7475619 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7475619 (ppo-u.5 coexpression data)

CoexMap"7489416"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_052312676.1 [sequence] [blastp]
XP_052312677.1 [sequence] [blastp]
XP_052312678.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, mito 4, cyto 1, plas 1, vacu 1, cyto_plas 1	(predict for XP_052312676.1)
chlo 4, mito 4, cyto 1, plas 1, vacu 1, cyto_plas 1	(predict for XP_052312677.1)
chlo 4, mito 4, cyto 1, plas 1, vacu 1, cyto_plas 1	(predict for XP_052312678.1)

Subcellular
localization
TargetP

mito 3	(predict for XP_052312676.1)
mito 3	(predict for XP_052312677.1)
mito 3	(predict for XP_052312678.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7475619	ppo-u.5 for 7483927	ppo-u.5 for 7487091	gma-u.5 for 113000756	gma-u.5 for 100794581	gma-u.5 for 100791390	mtr-u.5 for 11418389	mtr-u.5 for 25493937	ath-u.5 for AT1G18470	ath-u.5 for AT1G68820	ath-u.5 for AT1G73950	bra-r.6 for 103831868	bra-r.6 for 103835905	bra-r.6 for 103842699	vvi-u.5 for 100256061	vvi-u.5 for 100249082	ghi-r.1 for 121217708	ghi-r.1 for 107892097	ghi-r.1 for 107894160	bna-r.1 for 106361996	bna-r.1 for BNAC06G29610D	bna-r.1 for 111210412	cit-r.1 for 102614956	cit-r.1 for 102621132	sly-u.5 for 101259324	sly-u.5 for 101266509	sot-r.1 for 102605582	sot-r.1 for 102582701	nta-r.1 for 107824519	nta-r.1 for 107815502	nta-r.1 for 107761150	osa-u.5 for 4333857	osa-u.5 for 4347030	zma-u.5 for 100279431	zma-u.5 for 100282654	zma-u.5 for 100280299	tae-r.2 for 123087140	tae-r.2 for 123121492	tae-r.2 for 123103715	hvu-r.1 for 123396502	hvu-r.1 for 123447396	sbi-r.1 for 8055809	sbi-r.1 for 8063404	bdi-r.1 for 100846770	bdi-r.1 for 100822157	cre-r.1 for CHLRE_02g110000v5

Ortholog

Ortholog ID: 2183

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC7483927

uncharacterized LOC7487091

uncharacterized LOC113000756

uncharacterized LOC100794581

uncharacterized LOC100791390

uncharacterized LOC11418389

uncharacterized LOC25493937

Transmembrane Fragile-X-F-associated protein

uncharacterized LOC103831868

uncharacterized LOC103835905

uncharacterized LOC103872607

uncharacterized LOC100256061

uncharacterized LOC100249082

uncharacterized LOC107920505

uncharacterized LOC107887146

uncharacterized LOC107888754

uncharacterized LOC111206735

uncharacterized BNAC02G18630D

uncharacterized BNAA09G44560D

uncharacterized LOC102614956

uncharacterized LOC102621132

uncharacterized LOC101259324

uncharacterized LOC101266509

uncharacterized LOC102605582

uncharacterized LOC102582701

uncharacterized LOC107824519

uncharacterized LOC107815502

uncharacterized LOC107793725

uncharacterized LOC4333857

uncharacterized LOC4347030

putative RING zinc finger domain superfamily protein

protein binding protein

putative RING zinc finger domain superfamily protein

uncharacterized LOC123087140

uncharacterized LOC123121492

uncharacterized LOC123095831

uncharacterized LOC123396502

uncharacterized LOC123447396

uncharacterized LOC8055809

uncharacterized LOC8063404

uncharacterized LOC100846770

uncharacterized LOC100822157

uncharacterized protein

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00790	Folate biosynthesis	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00280	Valine, leucine and isoleucine degradation	2
vvi01210	2-Oxocarboxylic acid metabolism	2
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2
bna04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04136	Autophagy - other	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	2
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00561	Glycerolipid metabolism	2
sot00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00240	Pyrimidine metabolism	4
nta01232	Nucleotide metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	4
nta00240	Pyrimidine metabolism	2
nta00760	Nicotinate and nicotinamide metabolism	2
nta01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00071	Fatty acid degradation	6
tae01212	Fatty acid metabolism	6
tae04146	Peroxisome	6
tae00410	beta-Alanine metabolism	3
tae00592	alpha-Linolenic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01230	Biosynthesis of amino acids	8
tae00260	Glycine, serine and threonine metabolism	6
tae00750	Vitamin B6 metabolism	3
tae00261	Monobactam biosynthesis	3
tae00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00071	Fatty acid degradation	4
tae01212	Fatty acid metabolism	4
tae04146	Peroxisome	4
tae00061	Fatty acid biosynthesis	3
tae03440	Homologous recombination	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

7483927

7487091

113000756

100794581

100791390

11418389

25493937

838427

843214

843732

103831868

103835905

103872607

100256061

100249082

107920505

107887146

107888754

111206735

106357597

106369057

102614956

102621132

101259324

101266509

102605582

102582701

107824519

107815502

107793725

4333857

4347030

100279431

100282654

100280299

123087140

123121492

123095831

123396502

123447396

8055809

8063404

100846770

100822157

5725494

The preparation time of this page was 0.5 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	3	2	3	3	2	3	3	2	2	2	3	2	3	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7475619 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7475619 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**