ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7489821	uncharacterized LOC7489821
ppo-r.4	7489821	uncharacterized LOC7489821
ppo-u.5	7454725	uncharacterized LOC7454725
ppo-u.5	7481221	uncharacterized LOC7481221
ppo-u.5	7454561	uncharacterized LOC7454561
gma-u.5	100792212	uncharacterized LOC100792212
gma-u.5	100799958	uncharacterized LOC100799958
gma-u.5	100814722	uncharacterized LOC100814722
mtr-u.5	11444462	uncharacterized LOC11444462
mtr-u.5	25489781	uncharacterized LOC25489781
ath-u.5	AT2G25560	DNAJ heat shock N-terminal domain-containing protein
ath-u.5	AT5G53150	DnaJ heat shock amino-terminal domain protein
bra-r.6	103844793	uncharacterized LOC103844793
bra-r.6	103864672	uncharacterized LOC103864672
vvi-u.5	100263793	uncharacterized LOC100263793
vvi-u.5	104877364	uncharacterized LOC104877364
ghi-r.1	121232042	nuclear transcription factor Y subunit C-1
ghi-r.1	121219315	uncharacterized LOC121219315
ghi-r.1	107937626	uncharacterized LOC107937626
bna-r.1	125575071	uncharacterized LOC125575071
bna-r.1	106380565	uncharacterized LOC106380565
bna-r.1	111212622	uncharacterized LOC111212622
cit-r.1	102614074	uncharacterized LOC102614074
cit-r.1	102617358	uncharacterized LOC102617358
cit-r.1	102629529	hypothetical protein
sly-u.5	101250663	uncharacterized LOC101250663
sly-u.5	101261851	uncharacterized LOC101261851
sot-r.1	102583748	uncharacterized LOC102583748
sot-r.1	102590045	uncharacterized LOC102590045
nta-r.1	107758983	uncharacterized LOC107758983
nta-r.1	107765405	uncharacterized LOC107765405
nta-r.1	107787299	uncharacterized LOC107787299
osa-u.5	4335667	uncharacterized LOC4335667
osa-u.5	4333061	uncharacterized LOC4333061
osa-u.5	4329448	uncharacterized LOC4329448
zma-u.5	100383187	uncharacterized LOC100383187
zma-u.5	103641716	DNAJ heat shock N-terminal domain-containing protein
zma-u.5	100501122	DNAJ heat shock N-terminal domain-containing protein
tae-r.2	123045310	uncharacterized LOC123045310
tae-r.2	123093547	uncharacterized LOC123093547
tae-r.2	123072897	uncharacterized LOC123072897
hvu-r.1	123449817	uncharacterized LOC123449817
hvu-r.1	123445745	uncharacterized LOC123445745
hvu-r.1	123426542	uncharacterized LOC123426542
sbi-r.1	8056084	uncharacterized LOC8056084
sbi-r.1	8067625	uncharacterized LOC8067625
sbi-r.1	8070968	uncharacterized LOC8070968
bdi-r.1	100838049	uncharacterized LOC100838049
bdi-r.1	100842613	uncharacterized LOC100842613

Top 50 coexpressed genes to 7489821 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7489821 (ppo-u.5 coexpression data)

CoexMap"7489821"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_024438384.2 [sequence] [blastp]
XP_024438385.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, chlo 1, mito 1, vacu 1, cysk 1, chlo_mito 1	(predict for XP_024438384.2)
nucl 7, chlo 1, mito 1, vacu 1, cysk 1, chlo_mito 1	(predict for XP_024438385.2)

Subcellular
localization
TargetP

other 9	(predict for XP_024438384.2)
other 9	(predict for XP_024438385.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7489821	ppo-r.4 for 7489821	ppo-u.5 for 7454725	ppo-u.5 for 7481221	ppo-u.5 for 7454561	gma-u.5 for 100792212	gma-u.5 for 100799958	gma-u.5 for 100814722	mtr-u.5 for 11444462	mtr-u.5 for 25489781	ath-u.5 for AT2G25560	ath-u.5 for AT5G53150	bra-r.6 for 103844793	bra-r.6 for 103864672	vvi-u.5 for 100263793	vvi-u.5 for 104877364	ghi-r.1 for 121232042	ghi-r.1 for 121219315	ghi-r.1 for 107937626	bna-r.1 for 125575071	bna-r.1 for 106380565	bna-r.1 for 111212622	cit-r.1 for 102614074	cit-r.1 for 102617358	cit-r.1 for 102629529	sly-u.5 for 101250663	sly-u.5 for 101261851	sot-r.1 for 102583748	sot-r.1 for 102590045	nta-r.1 for 107758983	nta-r.1 for 107765405	nta-r.1 for 107787299	osa-u.5 for 4335667	osa-u.5 for 4333061	osa-u.5 for 4329448	zma-u.5 for 100383187	zma-u.5 for 103641716	zma-u.5 for 100501122	tae-r.2 for 123045310	tae-r.2 for 123093547	tae-r.2 for 123072897	hvu-r.1 for 123449817	hvu-r.1 for 123445745	hvu-r.1 for 123426542	sbi-r.1 for 8056084	sbi-r.1 for 8067625	sbi-r.1 for 8070968	bdi-r.1 for 100838049	bdi-r.1 for 100842613

Ortholog

Ortholog ID: 1606

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC7489821

uncharacterized LOC7454725

uncharacterized LOC7454561

uncharacterized LOC100814722

uncharacterized LOC100816712

uncharacterized LOC102661977

uncharacterized LOC11444462

uncharacterized LOC25489781

DNAJ heat shock N-terminal domain-containing protein

DnaJ heat shock amino-terminal domain protein

uncharacterized LOC103844793

uncharacterized LOC103864672

uncharacterized LOC100263793

uncharacterized LOC104877364

uncharacterized LOC107904256

nuclear transcription factor Y subunit C-1

uncharacterized LOC107890766

uncharacterized LOC106380565

uncharacterized LOC111212622

uncharacterized LOC102614074

uncharacterized LOC102617358

hypothetical protein

uncharacterized LOC101250663

uncharacterized LOC101261851

uncharacterized LOC102583748

uncharacterized LOC102590045

uncharacterized LOC107758983

uncharacterized LOC107787299

uncharacterized LOC107831689

uncharacterized LOC4335667

uncharacterized LOC4333061

uncharacterized LOC4329448

DNAJ heat shock N-terminal domain-containing protein

uncharacterized LOC100191440

uncharacterized LOC123093547

uncharacterized LOC123053146

uncharacterized LOC123189060

uncharacterized LOC123449817

uncharacterized LOC123445745

uncharacterized LOC123426542

uncharacterized LOC8056084

uncharacterized LOC8067625

uncharacterized LOC8070968

uncharacterized LOC100838049

uncharacterized LOC100842613

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03030	DNA replication	8
ppo00620	Pyruvate metabolism	2
ppo01200	Carbon metabolism	2
ppo03410	Base excision repair	2
ppo03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	5
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	8
nta03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	3
nta00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4
nta03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	6
osa03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00310	Lysine degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	4
hvu00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03015	mRNA surveillance pathway	2
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03083	Polycomb repressive complex	2

Expression

Expression pattern

Entrez Gene ID^*

7489821

7454725

7454561

100814722

100816712

102661977

11444462

25489781

817094

835396

103844793

103864672

100263793

104877364

107904256

121226755

107890766

106380565

111212622

102614074

102617358

102629529

101250663

101261851

102583748

102590045

107758983

107787299

107831689

4335667

4333061

4329448

103641716

100501122

100191440

123093547

123053146

123189060

123449817

123445745

123426542

8056084

8067625

8070968

100838049

100842613

The preparation time of this page was 0.1 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	3	2	2	2	2	3	3	3	2	2	3	3	3	3	3	3	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7489821 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7489821 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**