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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7490042   E3 ubiquitin-protein ligase MBR2 
 ppo-r.4   7490042   E3 ubiquitin-protein ligase MBR2 
 ppo-m.4   7490042   E3 ubiquitin-protein ligase MBR2 
 ppo-u.5   7465027   E3 ubiquitin-protein ligase MBR2 
 ppo-u.5   7462870   probable E3 ubiquitin-protein ligase RHG1A 
 gma-u.5   100784575   probable E3 ubiquitin-protein ligase RHG1A 
 gma-u.5   100791026   probable E3 ubiquitin-protein ligase RHG1A 
 gma-u.5   100809024   E3 ubiquitin-protein ligase MBR2 
 mtr-u.5   11446940   E3 ubiquitin-protein ligase MBR2 
 mtr-u.5   11414526   probable E3 ubiquitin-protein ligase RHG1A 
 ath-u.5   MBR1   RING/U-box superfamily protein 
 ath-u.5   MBR2   RING/U-box superfamily protein 
 ath-u.5   AT5G42940   RING/U-box superfamily protein 
 vvi-u.5   100258840   E3 ubiquitin-protein ligase MBR2 
 vvi-u.5   100267740   probable E3 ubiquitin-protein ligase RHG1A 
 sly-u.5   101252535   E3 ubiquitin-protein ligase MBR2 
 sly-u.5   101261170   E3 ubiquitin-protein ligase MBR2-like 
 sly-u.5   101262398   probable E3 ubiquitin-protein ligase RHG1A 
 osa-u.5   9272591   probable E3 ubiquitin-protein ligase HIP1 
 zma-u.5   100383211   putative RING zinc finger domain superfamily protein 
 zma-u.5   109943116   probable E3 ubiquitin-protein ligase HIP1 
 zma-u.5   100281500   uncharacterized LOC100281500 

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Top 50 coexpressed genes to 7490042 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7490042 (ppo-u.5 coexpression data)

CoexMap"7490042"


ppoLOC7490042 | Entrez gene ID : 7490042    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 2 3 2 3 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (225 genes)  IEA  
Protein XP_002313858.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1,  vacu 1,  cysk 1  (predict for XP_002313858.2)
Subcellular
localization
TargetP
other 7  (predict for XP_002313858.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7490042

.
ppo-r.4
for
7490042

.
ppo-m.4
for
7490042

.
ppo-u.5
for
7465027

.
ppo-u.5
for
7462870

.
gma-u.5
for
100784575

.
gma-u.5
for
100791026

.
gma-u.5
for
100809024

.
mtr-u.5
for
11446940

.
mtr-u.5
for
11414526

.
ath-u.5
for
MBR1

.
ath-u.5
for
MBR2

.
ath-u.5
for
AT5G42940

.
vvi-u.5
for
100258840

.
vvi-u.5
for
100267740

.
sly-u.5
for
101252535

.
sly-u.5
for
101261170

.
sly-u.5
for
101262398

.
osa-u.5
for
9272591

.
zma-u.5
for
100383211

.
zma-u.5
for
109943116

.
zma-u.5
for
100281500

.


Ortholog ID: 1370
Species ath ath gma gma sly sly osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna sbi sot sot cit cit bdi nta nta
Symbol AT5G42940 MBR2 LOC100809024 LOC100820322 LOC101249818 LOC101262398 LOC9272591 LOC109943116 LOC100281500 LOC103844361 LOC100258840 LOC100267740 LOC7465027 LOC7462870 LOC11446940 LOC11414526 LOC123190785 LOC123054931 LOC123428152 LOC107938056 LOC107894280 LOC106371878 LOC8068482 LOC102587147 LOC102580028 LOC102620199 LOC102620487 LOC100835376 LOC107797011 LOC107768864
Function* RING/U-box superfamily protein RING/U-box superfamily protein E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 uncharacterized LOC100281500 E3 ubiquitin-protein ligase MBR1 E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase HIP1 E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase HIP1 E3 ubiquitin-protein ligase MBR2-like E3 ubiquitin-protein ligase MBR2-like E3 ubiquitin-protein ligase MBR2-like E3 ubiquitin-protein ligase MBR2-like probable E3 ubiquitin-protein ligase HIP1 putative E3 ubiquitin-protein ligase RHG1A putative E3 ubiquitin-protein ligase RHG1A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00020 Citrate cycle (TCA cycle) 2
zma00785 Lipoic acid metabolism 2
zma01200 Carbon metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00020 Citrate cycle (TCA cycle) 2
zma00785 Lipoic acid metabolism 2
zma01200 Carbon metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae00920 Sulfur metabolism 3
tae01320 Sulfur cycle 3
tae00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00760 Nicotinate and nicotinamide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00310 Lysine degradation 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00310 Lysine degradation 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna00940 Phenylpropanoid biosynthesis 2
bna00240 Pyrimidine metabolism 2
bna00670 One carbon pool by folate 2
bna00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834306 829550 100809024 100820322 101249818 101262398 9272591 109943116 100281500 103844361 100258840 100267740 7465027 7462870 11446940 11414526 123190785 123054931 123428152 107938056 107894280 106371878 8068482 102587147 102580028 102620199 102620487 100835376 107797011 107768864
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