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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7490178   psbP domain-containing protein 2, chloroplastic 
 ppo-r.4   7490178   psbP domain-containing protein 2, chloroplastic 
 ppo-m.4   7490178   psbP domain-containing protein 2, chloroplastic 
 gma-u.5   100819837   psbP domain-containing protein 2, chloroplastic 
 gma-u.5   100776047   psbP domain-containing protein 2, chloroplastic 
 mtr-u.5   11424008   psbP domain-containing protein 2, chloroplastic 
 ath-u.5   AT2G28605   Photosystem II reaction center PsbP family protein 
 vvi-u.5   100245853   psbP domain-containing protein 2, chloroplastic 
 sly-u.5   101259233   psbP domain-containing protein 2, chloroplastic 
 osa-u.5   4335897   psbP domain-containing protein 2, chloroplastic 
 zma-u.5   100272548   PsbP domain-containing protein 2 chloroplastic 

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Top 50 coexpressed genes to 7490178 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7490178 (ppo-u.5 coexpression data)

CoexMap"7490178"


ppoLOC7490178 | Entrez gene ID : 7490178    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015979 [list] [network] photosynthesis  (119 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (22 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (39 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (49 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (301 genes)  IEA  
Protein XP_002309937.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  nucl_plas 3  (predict for XP_002309937.3)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002309937.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7490178

.
ppo-r.4
for
7490178

.
ppo-m.4
for
7490178

.
gma-u.5
for
100819837

.
gma-u.5
for
100776047

.
mtr-u.5
for
11424008

.
ath-u.5
for
AT2G28605

.
vvi-u.5
for
100245853

.
sly-u.5
for
101259233

.
osa-u.5
for
4335897

.
zma-u.5
for
100272548

.


Ortholog ID: 8402
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sot cit bdi nta nta
Symbol AT2G28605 LOC100776047 LOC100819837 LOC101259233 LOC4335897 LOC100272548 LOC103864902 LOC103858285 LOC100245853 LOC7490178 LOC11424008 LOC123189252 LOC123053350 LOC123430298 LOC107914439 LOC107897330 LOC106437383 LOC106446888 CHLRE_16g678851v5 LOC102599743 LOC102609035 LOC100837219 LOC107800868 LOC107776818
Function* Photosystem II reaction center PsbP family protein psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic PsbP domain-containing protein 2 chloroplastic psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic uncharacterized protein psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic psbP domain-containing protein 2, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
osa00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 5
ghi00380 Tryptophan metabolism 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 2
ghi00380 Tryptophan metabolism 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00750 Vitamin B6 metabolism 2
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817409 100776047 100819837 101259233 4335897 100272548 103864902 103858285 100245853 7490178 11424008 123189252 123053350 123430298 107914439 107897330 106437383 106446888 5721527 102599743 102609035 100837219 107800868 107776818
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