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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7490231   bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase 
 ppo-r.4   7490231   bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase 
 ppo-m.4   7490231   bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase 
 ppo-u.5   7471529   bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase 
 gma-u.5   100801361   bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase 
 gma-u.5   100780254   aminotransferase superfamily protein 
 gma-u.5   100776446   bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase 
 mtr-u.5   11440930   bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase 
 mtr-u.5   25499524   bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase 
 ath-u.5   AAT   aspartate aminotransferase 
 vvi-u.5   104882479   bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase 
 vvi-u.5   100245826   bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase 
 sly-u.5   PAT   prephenate aminotransferase 
 osa-u.5   4324941   bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase 
 zma-u.5   100276531   glutamate-oxaloacetate transaminase4 
 zma-u.5   100274472   uncharacterized LOC100274472 

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Top 50 coexpressed genes to 7490231 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7490231 (ppo-u.5 coexpression data)

CoexMap"7490231"


ppoLOC7490231 | Entrez gene ID : 7490231    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 2 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00350 [list] [network] Tyrosine metabolism (69 genes)
pop00360 [list] [network] Phenylalanine metabolism (52 genes)
pop00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (58 genes)
pop00950 [list] [network] Isoquinoline alkaloid biosynthesis (39 genes)
pop00960 [list] [network] Tropane, piperidine and pyridine alkaloid biosynthesis (34 genes)
pop01230 [list] [network] Biosynthesis of amino acids (287 genes)
GO BP
GO:0009058 [list] [network] biosynthetic process  (3363 genes)  IEA  
GO CC
GO MF
GO:0030170 [list] [network] pyridoxal phosphate binding  (105 genes)  IEA  
GO:0003824 [list] [network] catalytic activity  (9959 genes)  IEA  
Protein XP_002310582.2 [sequence] [blastp]
XP_052310748.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_002310582.2)
chlo 6,  chlo_mito 5,  mito 4  (predict for XP_052310748.1)
Subcellular
localization
TargetP
chlo 6,  mito 3  (predict for XP_002310582.2)
chlo 6,  mito 3  (predict for XP_052310748.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7490231

.
ppo-r.4
for
7490231

.
ppo-m.4
for
7490231

.
ppo-u.5
for
7471529

.
gma-u.5
for
100801361

.
gma-u.5
for
100780254

.
gma-u.5
for
100776446

.
mtr-u.5
for
11440930

.
mtr-u.5
for
25499524

.
ath-u.5
for
AAT

.
vvi-u.5
for
104882479

.
vvi-u.5
for
100245826

.
sly-u.5
for
PAT

.
osa-u.5
for
4324941

.
zma-u.5
for
100276531

.
zma-u.5
for
100274472

.


Ortholog ID: 5685
Species ath gma gma sly osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi bdi nta nta
Symbol AAT LOC100801361 LOC100780254 PAT LOC4324941 LOC100274472 LOC100276531 LOC103864337 LOC103837904 LOC104882479 LOC100245826 LOC7471529 LOC7490231 LOC11440930 LOC25499524 LOC123182128 LOC123134544 LOC123446456 LOC107954697 LOC107920431 LOC106446400 LOC106411660 CHLRE_02g147302v5 LOC8077154 LOC8062394 LOC102601259 LOC102629885 LOC100840215 LOC100830498 LOC107801356 LOC107800597
Function* aspartate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase aminotransferase superfamily protein prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase uncharacterized LOC100274472 glutamate-oxaloacetate transaminase4 bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase uncharacterized protein bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 9
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
ath01200 Carbon metabolism 3
ath00030 Pentose phosphate pathway 2
ath00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 9
gma00670 One carbon pool by folate 5
gma01200 Carbon metabolism 5
gma01240 Biosynthesis of cofactors 4
gma00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 4
gma01240 Biosynthesis of cofactors 3
gma00941 Flavonoid biosynthesis 3
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
gma00943 Isoflavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 10
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
sly01200 Carbon metabolism 3
sly00030 Pentose phosphate pathway 2
sly00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 11
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
osa00270 Cysteine and methionine metabolism 4
osa00670 One carbon pool by folate 4
osa00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 12
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
zma01200 Carbon metabolism 4
zma00270 Cysteine and methionine metabolism 4
zma00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 11
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
zma00270 Cysteine and methionine metabolism 4
zma00450 Selenocompound metabolism 3
zma00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 15
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 12
bra00999 Biosynthesis of various plant secondary metabolites 4
bra01240 Biosynthesis of cofactors 3
bra00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 13
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 12
bra00940 Phenylpropanoid biosynthesis 6
bra00360 Phenylalanine metabolism 3
bra00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 9
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
vvi00940 Phenylpropanoid biosynthesis 2
vvi01200 Carbon metabolism 2
vvi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
vvi01230 Biosynthesis of amino acids 8
vvi00940 Phenylpropanoid biosynthesis 2
vvi00020 Citrate cycle (TCA cycle) 2
vvi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 7
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
ppo00010 Glycolysis / Gluconeogenesis 3
ppo00071 Fatty acid degradation 2
ppo00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 10
ppo00010 Glycolysis / Gluconeogenesis 5
ppo01200 Carbon metabolism 5
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 9
mtr00350 Tyrosine metabolism 6
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
mtr00360 Phenylalanine metabolism 4
mtr00950 Isoquinoline alkaloid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 10
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
mtr01200 Carbon metabolism 5
mtr00350 Tyrosine metabolism 4
mtr00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 11
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
tae00270 Cysteine and methionine metabolism 5
tae01240 Biosynthesis of cofactors 5
tae00350 Tyrosine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 7
tae00480 Glutathione metabolism 5
tae00270 Cysteine and methionine metabolism 4
tae00030 Pentose phosphate pathway 4
tae01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 6
hvu01230 Biosynthesis of amino acids 5
hvu00940 Phenylpropanoid biosynthesis 4
hvu00030 Pentose phosphate pathway 3
hvu00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 11
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
ghi00350 Tyrosine metabolism 5
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00360 Phenylalanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 11
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
ghi00350 Tyrosine metabolism 5
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00360 Phenylalanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00350 Tyrosine metabolism 4
bna00360 Phenylalanine metabolism 4
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
bna00950 Isoquinoline alkaloid biosynthesis 4
bna00960 Tropane, piperidine and pyridine alkaloid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00350 Tyrosine metabolism 4
bna00360 Phenylalanine metabolism 4
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
bna00950 Isoquinoline alkaloid biosynthesis 4
bna00960 Tropane, piperidine and pyridine alkaloid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 5
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
cre00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 10
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
sbi00360 Phenylalanine metabolism 3
sbi00940 Phenylpropanoid biosynthesis 3
sbi00350 Tyrosine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 7
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
sbi00350 Tyrosine metabolism 3
sbi00360 Phenylalanine metabolism 2
sbi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 9
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
sot01200 Carbon metabolism 3
sot00030 Pentose phosphate pathway 2
sot00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 7
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
cit01200 Carbon metabolism 4
cit00620 Pyruvate metabolism 3
cit00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 10
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
bdi01200 Carbon metabolism 5
bdi00670 One carbon pool by folate 3
bdi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 12
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 10
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 13
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 10
nta00010 Glycolysis / Gluconeogenesis 3
nta01200 Carbon metabolism 3
nta00350 Tyrosine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816758 100801361 100780254 100736464 4324941 100274472 100276531 103864337 103837904 104882479 100245826 7471529 7490231 11440930 25499524 123182128 123134544 123446456 107954697 107920431 106446400 106411660 5720534 8077154 8062394 102601259 102629885 100840215 100830498 107801356 107800597
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