ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7491177	uncharacterized LOC7491177
ppo-r.4	7491177	uncharacterized LOC7491177
ppo-m.4	7491177	uncharacterized LOC7491177
ppo-u.5	7484739	uncharacterized LOC7484739
gma-u.5	100775923	HNH endonuclease domain-containing protein
gma-u.5	100527904	uncharacterized LOC100527904
gma-u.5	100500174	HNH endonuclease domain-containing protein
mtr-u.5	25493821	uncharacterized LOC25493821
mtr-u.5	25493851	retrovirus-related Pol polyprotein from transposon TNT 1-94
ath-u.5	AT3G47490	HNH endonuclease
ath-u.5	AT1G18680	HNH endonuclease domain-containing protein
vvi-u.5	100852985	uncharacterized LOC100852985
vvi-u.5	100262165	uncharacterized LOC100262165
sly-u.5	101255669	uncharacterized LOC101255669
osa-u.5	4331767	uncharacterized LOC4331767
osa-u.5	4348343	uncharacterized LOC4348343
zma-u.5	100277163	uncharacterized LOC100277163
zma-u.5	100382155	HNH endonuclease

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0004519 [list] [network] endonuclease activity	(140 genes)	IEA
GO:0008270 [list] [network] zinc ion binding	(777 genes)	IEA
GO:0003676 [list] [network] nucleic acid binding	(4002 genes)	IEA

Protein

XP_002313547.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 3, mito 2

(predict for XP_002313547.2)

Subcellular
localization
TargetP

chlo 9, mito 4

(predict for XP_002313547.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7491177 .	ppo-r.4 for 7491177 .	ppo-m.4 for 7491177 .	ppo-u.5 for 7484739 .	gma-u.5 for 100775923 .	gma-u.5 for 100527904 .	gma-u.5 for 100500174 .	mtr-u.5 for 25493821 .	mtr-u.5 for 25493851 .	ath-u.5 for AT3G47490 .	ath-u.5 for AT1G18680 .	vvi-u.5 for 100852985 .	vvi-u.5 for 100262165 .	sly-u.5 for 101255669 .	osa-u.5 for 4331767 .	osa-u.5 for 4348343 .	zma-u.5 for 100277163 .	zma-u.5 for 100382155 .

Ortholog

Ortholog ID: 3233

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

Function^*

HNH endonuclease domain-containing protein

HNH endonuclease

uncharacterized LOC100527904

HNH endonuclease domain-containing protein

uncharacterized LOC101255669

uncharacterized LOC4348343

uncharacterized LOC100277163

uncharacterized LOC103842690

uncharacterized LOC103873238

uncharacterized LOC100262165

uncharacterized LOC100852985

uncharacterized LOC7484739

uncharacterized LOC7491177

uncharacterized LOC25493821

retrovirus-related Pol polyprotein from transposon TNT 1-94

uncharacterized LOC123127832

uncharacterized LOC123093310

uncharacterized LOC123401642

uncharacterized LOC123449560

uncharacterized LOC107946521

uncharacterized LOC107934257

uncharacterized LOC106345244

uncharacterized LOC106435358

uncharacterized protein

uncharacterized LOC8067118

uncharacterized LOC8082121

uncharacterized LOC102587471

uncharacterized LOC102627352

uncharacterized LOC102630238

uncharacterized LOC100824123

uncharacterized LOC100825547

uncharacterized LOC107823203

uncharacterized LOC107830382

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03020	RNA polymerase	2
osa03420	Nucleotide excision repair	2
osa03040	Spliceosome	2
osa03010	Ribosome	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	4
zma03420	Nucleotide excision repair	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	3
vvi03040	Spliceosome	3
vvi03020	RNA polymerase	2
vvi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	7
mtr00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	4
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	3
ghi00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	3
ghi00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	4
bna00350	Tyrosine metabolism	2
bna00360	Phenylalanine metabolism	2
bna00750	Vitamin B6 metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	2
sbi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	4
bdi00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	3
nta00860	Porphyrin metabolism	2
nta00620	Pyruvate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

838449

823903

100527904

100500174

101255669

4348343

100277163

103842690

103873238

100262165

100852985

7484739

7491177

25493821

25493851

123127832

123093310

123401642

123449560

107946521

107934257

106345244

106435358

5729278

8067118

8082121

102587471

102627352

102630238

100824123

100825547

107823203

107830382

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7491177 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7491177 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	hvu	sot	tae	nta	bra	cit	ghi	bna	bdi	sbi	cre
Paralog	4	3	2	2	2	1	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7491177 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7491177 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**