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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7491925   beta-amylase 8 
 ppo-r.4   7491925   beta-amylase 8 
 ppo-m.4   7491925   beta-amylase 8 
 gma-u.5   100816365   beta-amylase 8 
 gma-u.5   100777004   beta-amylase 8 
 mtr-u.5   11407894   beta-amylase 8 
 ath-u.5   BMY2   beta-amylase 2 
 vvi-u.5   100254478   beta-amylase 8 
 sly-u.5   101251494   beta-amylase 8 
 osa-u.5   4328183   beta-amylase 8 

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Top 50 coexpressed genes to 7491925 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7491925 (ppo-u.5 coexpression data)

CoexMap"7491925"


ppoLOC7491925 | Entrez gene ID : 7491925    
Species ppo gma mtr ath vvi sly osa sbi nta bra cre hvu cit bdi sot zma tae bna ghi
Paralog 3 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00500 [list] [network] Starch and sucrose metabolism (188 genes)
GO BP
GO:0000272 [list] [network] polysaccharide catabolic process  (46 genes)  IEA  
GO CC
GO MF
GO:0016161 [list] [network] beta-amylase activity  (12 genes)  IEA  
Protein XP_002304400.2 [sequence] [blastp]
XP_024453738.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002304400.2)
nucl 9  (predict for XP_024453738.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_002304400.2)
other 7,  chlo 4  (predict for XP_024453738.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7491925

.
ppo-r.4
for
7491925

.
ppo-m.4
for
7491925

.
gma-u.5
for
100816365

.
gma-u.5
for
100777004

.
mtr-u.5
for
11407894

.
ath-u.5
for
BMY2

.
vvi-u.5
for
100254478

.
sly-u.5
for
101251494

.
osa-u.5
for
4328183

.


Ortholog ID: 11436
Species ath gma gma sly osa bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol BMY2 LOC100777004 LOC100816365 LOC101251494 LOC4328183 LOC103853626 LOC100254478 LOC7491925 LOC11407894 LOC123136044 LOC123131992 LOC123402403 LOC107933475 LOC107944311 LOC106361233 LOC106425547 LOC8069915 LOC102598339 LOC102616084 LOC100832151 LOC107795612 LOC107786698
Function* beta-amylase 2 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8 beta-amylase 8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03420 Nucleotide excision repair 2
sly00500 Starch and sucrose metabolism 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 6
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
bna00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
bna01240 Biosynthesis of cofactors 4
bna00290 Valine, leucine and isoleucine biosynthesis 2
bna00660 C5-Branched dibasic acid metabolism 2
bna01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00290 Valine, leucine and isoleucine biosynthesis 4
sot01230 Biosynthesis of amino acids 4
sot03010 Ribosome 4
sot00770 Pantothenate and CoA biosynthesis 3
sot01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 3
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04144 Endocytosis 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 4
nta04141 Protein processing in endoplasmic reticulum 3
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834566 100777004 100816365 101251494 4328183 103853626 100254478 7491925 11407894 123136044 123131992 123402403 107933475 107944311 106361233 106425547 8069915 102598339 102616084 100832151 107795612 107786698
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