ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7491928	protein DYAD
ppo-r.4	7491928	protein DYAD
ppo-m.4	7491928	protein DYAD
ppo-u.5	7465894	protein DYAD
ppo-u.5	18097752	protein DYAD
gma-u.5	100806484	protein DYAD
gma-u.5	100792586	protein DYAD
mtr-u.5	25489897	protein DYAD
ath-u.5	AT5G23610	DYAD protein
bra-r.6	103844390	protein DYAD
bra-r.6	103852155	protein DYAD
vvi-u.5	100247650	protein AMEIOTIC 1
ghi-r.1	107924377	protein DYAD
ghi-r.1	107911699	protein DYAD
bna-r.1	111198675	protein AMEIOTIC 1 homolog
bna-r.1	125597787	protein AMEIOTIC 1 homolog
bna-r.1	111215589	protein DYAD-like
cit-r.1	102607979	protein DYAD
osa-u.5	107277282	protein AMEIOTIC 1 homolog
osa-u.5	4333586	protein AMEIOTIC 1 homolog
zma-u.5	103640625	Protein DYAD
zma-u.5	100271891	ameiotic 1
hvu-r.1	123452080	protein AMEIOTIC 1 homolog
bdi-r.1	100821373	protein DYAD

Annotation

functional annotation

KEGG

GO BP

GO:0051177 [list] [network] meiotic sister chromatid cohesion	(13 genes)	IEA
GO:0007131 [list] [network] reciprocal meiotic recombination	(37 genes)	IEA
GO:0051321 [list] [network] meiotic cell cycle	(90 genes)	IEA

GO CC

GO MF

Protein

XP_002303485.4 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_002303485.4)

Subcellular
localization
TargetP

other 8

(predict for XP_002303485.4)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7491928	ppo-r.4 for 7491928	ppo-m.4 for 7491928	ppo-u.5 for 7465894	ppo-u.5 for 18097752	gma-u.5 for 100806484	gma-u.5 for 100792586	mtr-u.5 for 25489897	ath-u.5 for AT5G23610	bra-r.6 for 103844390	bra-r.6 for 103852155	vvi-u.5 for 100247650	ghi-r.1 for 107924377	ghi-r.1 for 107911699	bna-r.1 for 111198675	bna-r.1 for 125597787	bna-r.1 for 111215589	cit-r.1 for 102607979	osa-u.5 for 107277282	osa-u.5 for 4333586	zma-u.5 for 103640625	zma-u.5 for 100271891	hvu-r.1 for 123452080	bdi-r.1 for 100821373

Ortholog

Ortholog ID: 2939

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

osa

zma

hvu

bdi

Symbol

Function^*

protein DYAD

DYAD protein

protein DYAD

protein AMEIOTIC 1

protein DYAD

protein AMEIOTIC 1 homolog

protein DYAD-like

protein DYAD

protein AMEIOTIC 1 homolog

Protein DYAD

ameiotic 1

protein AMEIOTIC 1 homolog

protein DYAD

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	3
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2
mtr00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
mtr01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	4
bra00071	Fatty acid degradation	2
bra00592	alpha-Linolenic acid metabolism	2
bra01040	Biosynthesis of unsaturated fatty acids	2
bra01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	6
ghi03420	Nucleotide excision repair	6
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	6
ghi03420	Nucleotide excision repair	6
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	2
bna03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03250	Viral life cycle - HIV-1	4
bna00562	Inositol phosphate metabolism	2
bna04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	2
cit03015	mRNA surveillance pathway	2
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	3
zma04141	Protein processing in endoplasmic reticulum	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00310	Lysine degradation	3
hvu04016	MAPK signaling pathway - plant	3
hvu04075	Plant hormone signal transduction	3
hvu00010	Glycolysis / Gluconeogenesis	2
hvu00620	Pyruvate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

7491928

7465894

18097752

100806484

100792586

25489897

832427

103844390

103852155

103854887

100247650

107924377

107911699

106428470

106348316

125581907

102607979

107277282

4333586

103640625

100271891

123452080

100821373

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7491928 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7491928 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	osa	zma	hvu	bdi	sbi	cre	tae	sly	sot	nta
Paralog	5	2	1	1	2	1	2	3	1	2	2	1	1	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7491928 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7491928 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**