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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7491995   NAD(P)H-quinone oxidoreductase subunit U, chloroplastic 
 ppo-r.4   7491995   NAD(P)H-quinone oxidoreductase subunit U, chloroplastic 
 ppo-m.4   7491995   NAD(P)H-quinone oxidoreductase subunit U, chloroplastic 
 gma-u.5   100793741   NAD(P)H-quinone oxidoreductase subunit U, chloroplastic 
 gma-u.5   100782990   NAD(P)H-quinone oxidoreductase subunit U, chloroplastic 
 mtr-u.5   11421544   NAD(P)H-quinone oxidoreductase subunit U, chloroplastic 
 ath-u.5   NdhU   Chaperone DnaJ-domain superfamily protein 
 vvi-u.5   100257708   NAD(P)H-quinone oxidoreductase subunit U, chloroplastic 
 sly-u.5   101259949   NAD(P)H-quinone oxidoreductase subunit U, chloroplastic 
 osa-u.5   4352264   NAD(P)H-quinone oxidoreductase subunit U, chloroplastic 
 zma-u.5   103640914   NAD(P)H-quinone oxidoreductase subunit U chloroplastic 

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Top 50 coexpressed genes to 7491995 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7491995 (ppo-u.5 coexpression data)

CoexMap"7491995"


ppoLOC7491995 | Entrez gene ID : 7491995    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0010598 [list] [network] NAD(P)H dehydrogenase complex (plastoquinone)  (4 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (105 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (718 genes)  IEA  
GO MF
Protein XP_002309471.2 [sequence] [blastp]
XP_024459268.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002309471.2)
chlo 9  (predict for XP_024459268.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_002309471.2)
chlo 6  (predict for XP_024459268.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7491995

.
ppo-r.4
for
7491995

.
ppo-m.4
for
7491995

.
gma-u.5
for
100793741

.
gma-u.5
for
100782990

.
mtr-u.5
for
11421544

.
ath-u.5
for
NdhU

.
vvi-u.5
for
100257708

.
sly-u.5
for
101259949

.
osa-u.5
for
4352264

.
zma-u.5
for
103640914

.


Ortholog ID: 11420
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol NdhU LOC100793741 LOC100782990 LOC101259949 LOC4352264 LOC103640914 LOC103845598 LOC100257708 LOC7491995 LOC11421544 LOC123119914 LOC123102771 LOC123395696 LOC107958846 LOC107907046 LOC106421301 LOC106371683 LOC8064093 LOC102593240 LOC102613548 LOC100840040 LOC107780992 LOC107768034
Function* Chaperone DnaJ-domain superfamily protein NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic hypothetical protein NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NAD(P)H-quinone oxidoreductase subunit U, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 4
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 4
sly00260 Glycine, serine and threonine metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 3
osa00710 Carbon fixation by Calvin cycle 3
osa01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 4
zma01200 Carbon metabolism 4
zma01230 Biosynthesis of amino acids 4
zma00010 Glycolysis / Gluconeogenesis 3
zma00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00710 Carbon fixation by Calvin cycle 3
bra01200 Carbon metabolism 3
bra00020 Citrate cycle (TCA cycle) 2
bra00270 Cysteine and methionine metabolism 2
bra00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 2
mtr00710 Carbon fixation by Calvin cycle 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 4
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 8
ghi00630 Glyoxylate and dicarboxylate metabolism 6
ghi00195 Photosynthesis 4
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00260 Glycine, serine and threonine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi01200 Carbon metabolism 4
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi00500 Starch and sucrose metabolism 3
sbi00460 Cyanoamino acid metabolism 2
sbi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 7
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 7
cit00710 Carbon fixation by Calvin cycle 6
cit00195 Photosynthesis 4
cit00010 Glycolysis / Gluconeogenesis 3
cit00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 4
bdi01200 Carbon metabolism 4
bdi00250 Alanine, aspartate and glutamate metabolism 2
bdi00260 Glycine, serine and threonine metabolism 2
bdi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00710 Carbon fixation by Calvin cycle 6
nta01200 Carbon metabolism 6
nta00010 Glycolysis / Gluconeogenesis 3
nta00030 Pentose phosphate pathway 3
nta00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00710 Carbon fixation by Calvin cycle 6
nta01200 Carbon metabolism 6
nta00010 Glycolysis / Gluconeogenesis 3
nta00030 Pentose phosphate pathway 3
nta00051 Fructose and mannose metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832247 100793741 100782990 101259949 4352264 103640914 103845598 100257708 7491995 11421544 123119914 123102771 123395696 107958846 107907046 106421301 106371683 8064093 102593240 102613548 100840040 107780992 107768034
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