ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7492424	bet1-like SNARE 1-2
ppo-r.4	7492424	bet1-like SNARE 1-2
ppo-m.4	7492424	bet1-like SNARE 1-2
ppo-u.5	7471984	bet1-like SNARE 1-1
ppo-u.5	7476898	bet1-like SNARE 1-1
gma-u.5	100818014	bet1-like SNARE 1-2
gma-u.5	100814836	bet1-like SNARE 1-1
gma-u.5	100785456	bet1-like SNARE 1-2
mtr-u.5	25483015	bet1-like SNARE 1-2
mtr-u.5	25484305	bet1-like SNARE 1-1
ath-u.5	BS14A	BET1P/SFT1P-like protein 14A
ath-u.5	ATBET12	Target SNARE coiled-coil domain protein
bra-r.6	103830146	bet1-like SNARE 1-1
bra-r.6	103833440	bet1-like SNARE 1-2
bra-r.6	103841711	bet1-like SNARE 1-1
vvi-u.5	100266980	bet1-like SNARE 1-1
vvi-u.5	100266580	bet1-like SNARE 1-1
ghi-r.1	107936725	bet1-like SNARE 1-1
ghi-r.1	107922707	bet1-like SNARE 1-1
ghi-r.1	107922907	bet1-like SNARE 1-1
bna-r.1	106412181	bet1-like SNARE 1-2
bna-r.1	111206757	bet1-like SNARE 1-1
bna-r.1	106394436	bet1-like SNARE 1-2
cit-r.1	102622576	bet1-like SNARE 1-1
cit-r.1	102627317	bet1-like SNARE 1-2
sly-u.5	101245764	bet1-like SNARE 1-1
sly-u.5	101268613	bet1-like SNARE 1-2
sot-r.1	102581060	bet1-like SNARE 1-1
sot-r.1	102600606	bet1-like SNARE 1-2
sot-r.1	102604632	bet1-like SNARE 1-1
nta-r.1	107799073	bet1-like SNARE 1-1
nta-r.1	107824563	bet1-like SNARE 1-1
nta-r.1	107805119	bet1-like SNARE 1-2
osa-u.5	4331172	bet1-like SNARE 1-1
osa-u.5	4346340	bet1-like SNARE 1-1
zma-u.5	100284212	uncharacterized LOC100284212
zma-u.5	100285054	BET1
zma-u.5	103654111	uncharacterized LOC103654111
tae-r.2	123146219	bet1-like SNARE 1-1
tae-r.2	123139912	bet1-like SNARE 1-1
hvu-r.1	123401127	bet1-like SNARE 1-1
sbi-r.1	8054839	bet1-like SNARE 1-1
sbi-r.1	110434327	bet1-like SNARE 1-1
bdi-r.1	100839222	bet1-like SNARE 1-1
bdi-r.1	100839307	bet1-like SNARE 1-1
cre-r.1	CHLRE_03g198100v5	uncharacterized protein

Top 50 coexpressed genes to 7492424 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7492424 (ppo-u.5 coexpression data)

CoexMap"7492424"

[Cytoscape]

Annotation

functional annotation

KEGG

pop04130 [list] [network] SNARE interactions in vesicular transport (63 genes)

GO BP

GO CC

GO MF

Protein

XP_002314641.3 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, golg 2, chlo_mito 2, mito 1, plas 1, mito_plas 1

(predict for XP_002314641.3)

Subcellular
localization
TargetP

other 7, mito 3

(predict for XP_002314641.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7492424	ppo-r.4 for 7492424	ppo-m.4 for 7492424	ppo-u.5 for 7471984	ppo-u.5 for 7476898	gma-u.5 for 100818014	gma-u.5 for 100814836	gma-u.5 for 100785456	mtr-u.5 for 25483015	mtr-u.5 for 25484305	ath-u.5 for BS14A	ath-u.5 for ATBET12	bra-r.6 for 103830146	bra-r.6 for 103833440	bra-r.6 for 103841711	vvi-u.5 for 100266980	vvi-u.5 for 100266580	ghi-r.1 for 107936725	ghi-r.1 for 107922707	ghi-r.1 for 107922907	bna-r.1 for 106412181	bna-r.1 for 111206757	bna-r.1 for 106394436	cit-r.1 for 102622576	cit-r.1 for 102627317	sly-u.5 for 101245764	sly-u.5 for 101268613	sot-r.1 for 102581060	sot-r.1 for 102600606	sot-r.1 for 102604632	nta-r.1 for 107799073	nta-r.1 for 107824563	nta-r.1 for 107805119	osa-u.5 for 4331172	osa-u.5 for 4346340	zma-u.5 for 100284212	zma-u.5 for 100285054	zma-u.5 for 103654111	tae-r.2 for 123146219	tae-r.2 for 123139912	hvu-r.1 for 123401127	sbi-r.1 for 8054839	sbi-r.1 for 110434327	bdi-r.1 for 100839222	bdi-r.1 for 100839307	cre-r.1 for CHLRE_03g198100v5

Ortholog

Ortholog ID: 2916

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

BS14A

ATBET12

Function^*

bet1-like SNARE 1-2

bet1-like SNARE 1-1

bet1-like SNARE 1-2

uncharacterized LOC100500028

bet1-like SNARE 1-2

bet1-like SNARE 1-1

BET1P/SFT1P-like protein 14A

Target SNARE coiled-coil domain protein

bet1-like SNARE 1-1

bet1-like SNARE 1-2

bet1-like SNARE 1-1

bet1-like SNARE 1-2

bet1-like SNARE 1-1

bet1-like SNARE 1-2

bet1-like SNARE 1-1

bet1-like SNARE 1-2

bet1-like SNARE 1-1

bet1-like SNARE 1-2

bet1-like SNARE 1-1

bet1-like SNARE 1-2

bet1-like SNARE 1-1

uncharacterized LOC100284212

BET1

uncharacterized LOC103654111

bet1-like SNARE 1-1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	4
ppo04120	Ubiquitin mediated proteolysis	3
ppo04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03060	Protein export	3
gma04141	Protein processing in endoplasmic reticulum	3
gma04145	Phagosome	3
gma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04130	SNARE interactions in vesicular transport	2
gma00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2
gma04130	SNARE interactions in vesicular transport	2
gma00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00240	Pyrimidine metabolism	2
mtr01232	Nucleotide metabolism	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04130	SNARE interactions in vesicular transport	3
mtr04141	Protein processing in endoplasmic reticulum	3
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	4
ath04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	2
bra04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	8
ghi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	8
ghi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	6
bna00270	Cysteine and methionine metabolism	2
bna03013	Nucleocytoplasmic transport	2
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	6
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03083	Polycomb repressive complex	2
cit04120	Ubiquitin mediated proteolysis	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04130	SNARE interactions in vesicular transport	3
sly00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	3
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00510	N-Glycan biosynthesis	2
sot00513	Various types of N-glycan biosynthesis	2
sot00230	Purine metabolism	2
sot00920	Sulfur metabolism	2
sot01320	Sulfur cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03083	Polycomb repressive complex	3
nta04120	Ubiquitin mediated proteolysis	3
nta04141	Protein processing in endoplasmic reticulum	3
nta04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	3
osa04144	Endocytosis	2
osa04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00061	Fatty acid biosynthesis	2
osa01212	Fatty acid metabolism	2
osa00780	Biotin metabolism	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	7
zma04141	Protein processing in endoplasmic reticulum	4
zma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	3
zma01250	Biosynthesis of nucleotide sugars	3
zma04141	Protein processing in endoplasmic reticulum	3
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	3
hvu04136	Autophagy - other	2
hvu04141	Protein processing in endoplasmic reticulum	2
hvu00600	Sphingolipid metabolism	2
hvu04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03420	Nucleotide excision repair	3
sbi00190	Oxidative phosphorylation	2
sbi04120	Ubiquitin mediated proteolysis	2
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04145	Phagosome	6
bdi04517	IgSF CAM signaling	6
bdi04814	Motor proteins	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	2
bdi04145	Phagosome	2
bdi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	4

Expression

Expression pattern

Entrez Gene ID^*

7492424

7471984

7476898

100818014

100785456

100500028

25483015

25484305

824986

827091

103830146

103833440

103841711

100266980

100266580

107936725

107922707

107928471

106394436

106368257

106356835

102622576

102627317

101245764

101268613

102581060

102600606

102604632

107799073

107778211

107809396

4331172

4346340

100284212

100285054

103654111

123146219

123139912

123401127

8054839

110434327

100839222

100839307

5718798

The preparation time of this page was 0.2 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	3	2	2	3	2	3	3	2	2	3	3	2	3	2	1	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7492424 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7492424 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**