ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7492432	uncharacterized LOC7492432
ppo-r.4	7492432	uncharacterized LOC7492432
ppo-u.5	7491411	uncharacterized LOC7491411
ppo-u.5	7489081	uncharacterized LOC7489081
ppo-u.5	7475141	uncharacterized LOC7475141
gma-u.5	100810331	uncharacterized LOC100810331
gma-u.5	100808222	stAR-related lipid transfer protein 7, mitochondrial
gma-u.5	100802806	uncharacterized LOC100802806
mtr-u.5	11443161	stAR-related lipid transfer protein 7, mitochondrial
mtr-u.5	11444767	uncharacterized LOC11444767
mtr-u.5	25484577	phosphatidylcholine transfer protein
ath-u.5	AT3G23080	Polyketide cyclase/dehydrase and lipid transport superfamily protein
ath-u.5	AT4G14500	Polyketide cyclase/dehydrase and lipid transport superfamily protein
ath-u.5	AT5G54170	Polyketide cyclase/dehydrase and lipid transport superfamily protein
bra-r.6	103844879	uncharacterized LOC103844879
bra-r.6	103872218	uncharacterized LOC103872218
vvi-u.5	100263172	uncharacterized LOC100263172
vvi-u.5	100247984	uncharacterized LOC100247984
ghi-r.1	107890805	uncharacterized LOC107890805
ghi-r.1	107891908	stAR-related lipid transfer protein 7, mitochondrial
ghi-r.1	107904531	uncharacterized LOC107904531
bna-r.1	106437537	uncharacterized LOC106437537
bna-r.1	BNAC08G47370D	uncharacterized BNAC08G47370D
bna-r.1	106405771	uncharacterized LOC106405771
cit-r.1	102627263	uncharacterized LOC102627263
cit-r.1	102620401	uncharacterized LOC102620401
cit-r.1	102612642	uncharacterized LOC102612642
sly-u.5	101253385	uncharacterized LOC101253385
sly-u.5	101249155	uncharacterized LOC101249155
sly-u.5	101259469	uncharacterized LOC101259469
sot-r.1	102582708	uncharacterized LOC102582708
sot-r.1	102588037	uncharacterized LOC102588037
sot-r.1	102587815	uncharacterized LOC102587815
nta-r.1	107779655	uncharacterized LOC107779655
nta-r.1	107759127	uncharacterized LOC107759127
nta-r.1	107763898	uncharacterized LOC107763898
osa-u.5	107280196	uncharacterized LOC107280196
osa-u.5	4334969	uncharacterized LOC4334969
osa-u.5	4342587	uncharacterized LOC4342587
zma-u.5	100281983	uncharacterized LOC100281983
zma-u.5	100382153	Polyketide cyclase/dehydrase and lipid transport superfamily protein
zma-u.5	100274578	Polyketide cyclase/dehydrase and lipid transport superfamily protein
tae-r.2	123044833	uncharacterized LOC123044833
tae-r.2	123135983	uncharacterized LOC123135983
tae-r.2	123043076	stAR-related lipid transfer protein 7, mitochondrial
hvu-r.1	123431485	uncharacterized LOC123431485
hvu-r.1	123401739	uncharacterized LOC123401739
hvu-r.1	123426201	uncharacterized LOC123426201
sbi-r.1	110436563	uncharacterized LOC110436563
sbi-r.1	8055062	uncharacterized LOC8055062
sbi-r.1	8056632	uncharacterized LOC8056632
bdi-r.1	100828419	uncharacterized LOC100828419
bdi-r.1	100841092	uncharacterized LOC100841092
bdi-r.1	100824806	uncharacterized LOC100824806
cre-r.1	CHLRE_03g174850v5	uncharacterized protein

Top 50 coexpressed genes to 7492432 (ppo-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7492432 (ppo-u.5 coexpression data)

CoexMap"7492432"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0008289 [list] [network] lipid binding

(331 genes)

IEA

Protein

XP_024467132.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, cyto 1, plas 1, extr 1, E.R. 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_024467132.1)

Subcellular
localization
TargetP

other 9

(predict for XP_024467132.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7492432	ppo-r.4 for 7492432	ppo-u.5 for 7491411	ppo-u.5 for 7489081	ppo-u.5 for 7475141	gma-u.5 for 100810331	gma-u.5 for 100808222	gma-u.5 for 100802806	mtr-u.5 for 11443161	mtr-u.5 for 11444767	mtr-u.5 for 25484577	ath-u.5 for AT3G23080	ath-u.5 for AT4G14500	ath-u.5 for AT5G54170	bra-r.6 for 103844879	bra-r.6 for 103872218	vvi-u.5 for 100263172	vvi-u.5 for 100247984	ghi-r.1 for 107890805	ghi-r.1 for 107891908	ghi-r.1 for 107904531	bna-r.1 for 106437537	bna-r.1 for BNAC08G47370D	bna-r.1 for 106405771	cit-r.1 for 102627263	cit-r.1 for 102620401	cit-r.1 for 102612642	sly-u.5 for 101253385	sly-u.5 for 101249155	sly-u.5 for 101259469	sot-r.1 for 102582708	sot-r.1 for 102588037	sot-r.1 for 102587815	nta-r.1 for 107779655	nta-r.1 for 107759127	nta-r.1 for 107763898	osa-u.5 for 107280196	osa-u.5 for 4334969	osa-u.5 for 4342587	zma-u.5 for 100281983	zma-u.5 for 100382153	zma-u.5 for 100274578	tae-r.2 for 123044833	tae-r.2 for 123135983	tae-r.2 for 123043076	hvu-r.1 for 123431485	hvu-r.1 for 123401739	hvu-r.1 for 123426201	sbi-r.1 for 110436563	sbi-r.1 for 8055062	sbi-r.1 for 8056632	bdi-r.1 for 100828419	bdi-r.1 for 100841092	bdi-r.1 for 100824806	cre-r.1 for CHLRE_03g174850v5

Ortholog

Ortholog ID: 881

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

CP5

Function^*

uncharacterized LOC7492432

uncharacterized LOC7489081

uncharacterized LOC7473453

stAR-related lipid transfer protein 7, mitochondrial

uncharacterized LOC100785446

stAR-related lipid transfer protein 7, mitochondrial

uncharacterized LOC11444767

phosphatidylcholine transfer protein

Polyketide cyclase/dehydrase and lipid transport superfamily protein

uncharacterized LOC103844879

uncharacterized LOC103833443

uncharacterized LOC100263172

uncharacterized LOC100247984

uncharacterized LOC107904531

uncharacterized LOC107924319

uncharacterized LOC121232235

phosphatidylcholine transfer protein

uncharacterized LOC106349065

uncharacterized LOC106437910

uncharacterized LOC102627263

uncharacterized LOC102620401

uncharacterized LOC102612642

uncharacterized LOC101253385

uncharacterized LOC101249155

uncharacterized LOC101259469

uncharacterized LOC102582708

uncharacterized LOC102588037

uncharacterized LOC102587815

uncharacterized LOC107759127

uncharacterized LOC107780650

uncharacterized LOC142162730

uncharacterized LOC107280196

uncharacterized LOC4334969

uncharacterized LOC4342587

uncharacterized LOC100281983

Polyketide cyclase/dehydrase and lipid transport superfamily protein

stAR-related lipid transfer protein 7, mitochondrial

uncharacterized LOC123131961

uncharacterized LOC123431485

uncharacterized LOC123401739

uncharacterized LOC123426201

uncharacterized LOC8055062

uncharacterized LOC8056632

uncharacterized LOC8068277

uncharacterized LOC100828419

uncharacterized LOC100841092

uncharacterized LOC100824806

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2
ppo03015	mRNA surveillance pathway	2
ppo04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00230	Purine metabolism	2
gma00730	Thiamine metabolism	2
gma01232	Nucleotide metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	4
gma00620	Pyruvate metabolism	4
gma01200	Carbon metabolism	4
gma01240	Biosynthesis of cofactors	3
gma00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00280	Valine, leucine and isoleucine degradation	3
mtr00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	2
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01200	Carbon metabolism	7
vvi00630	Glyoxylate and dicarboxylate metabolism	5
vvi00260	Glycine, serine and threonine metabolism	3
vvi00710	Carbon fixation by Calvin cycle	3
vvi04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04146	Peroxisome	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00380	Tryptophan metabolism	2
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00902	Monoterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04130	SNARE interactions in vesicular transport	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00071	Fatty acid degradation	3
sot00592	alpha-Linolenic acid metabolism	3
sot01040	Biosynthesis of unsaturated fatty acids	3
sot01200	Carbon metabolism	3
sot01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	2
nta01240	Biosynthesis of cofactors	2
nta00600	Sphingolipid metabolism	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00860	Porphyrin metabolism	2
osa00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	3
osa00790	Folate biosynthesis	2
osa00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00561	Glycerolipid metabolism	2
zma00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	2
zma03060	Protein export	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	4
tae01200	Carbon metabolism	4
tae00020	Citrate cycle (TCA cycle)	3
tae00620	Pyruvate metabolism	3
tae00785	Lipoic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00860	Porphyrin metabolism	2
tae01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00860	Porphyrin metabolism	4
tae01240	Biosynthesis of cofactors	4
tae00590	Arachidonic acid metabolism	2
tae00790	Folate biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00860	Porphyrin metabolism	2
hvu01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	2
sbi01250	Biosynthesis of nucleotide sugars	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00620	Pyruvate metabolism	2
sbi00710	Carbon fixation by Calvin cycle	2
sbi01200	Carbon metabolism	2
sbi00520	Amino sugar and nucleotide sugar metabolism	2
sbi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00906	Carotenoid biosynthesis	2
bdi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00860	Porphyrin metabolism	5
cre01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

7492432

7489081

7473453

100808222

100799834

100785446

11443161

11444767

25484577

821882

835505

842780

103844879

103833443

100263172

100247984

107904531

107924319

121232235

106367510

106349065

106437910

102627263

102620401

102612642

101253385

101249155

101259469

102582708

102588037

102587815

107759127

107780650

142162730

107280196

4334969

4342587

100281983

100274578

100501576

123043076

123143480

123131961

123431485

123401739

123426201

8055062

8056632

8068277

100828419

100841092

100824806

5728874

The preparation time of this page was 0.2 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	3	3	3	2	2	3	3	3	3	3	3	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7492432 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7492432 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**