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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7492773   DEAD-box ATP-dependent RNA helicase 31 
 ppo-r.4   7492773   DEAD-box ATP-dependent RNA helicase 31 
 ppo-u.5   7457393   DEAD-box ATP-dependent RNA helicase 31 
 gma-u.5   100795739   DEAD-box ATP-dependent RNA helicase 31 
 gma-u.5   100799999   DEAD-box ATP-dependent RNA helicase 31 
 mtr-u.5   25500711   DEAD-box ATP-dependent RNA helicase 31 
 mtr-u.5   25500710   DEAD-box ATP-dependent RNA helicase 31 
 mtr-u.5   25500712   DEAD-box ATP-dependent RNA helicase 31 
 ath-u.5   PDE340   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   STRS2   DEA(D/H)-box RNA helicase family protein 
 ath-u.5   AT5G63630   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 vvi-u.5   100258444   DEAD-box ATP-dependent RNA helicase 31 
 sly-u.5   101245996   DEAD-box ATP-dependent RNA helicase 31-like 
 osa-u.5   4326614   DEAD-box ATP-dependent RNA helicase 25-like 
 osa-u.5   4326615   DEAD-box ATP-dependent RNA helicase 26-like 
 osa-u.5   4341186   DEAD-box ATP-dependent RNA helicase 31-like 
 zma-u.5   103638522   DEAD-box ATP-dependent RNA helicase 31 
 zma-u.5   103651490   DEAD-box ATP-dependent RNA helicase 25 
 zma-u.5   100279341   uncharacterized LOC100279341 

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Top 50 coexpressed genes to 7492773 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7492773 (ppo-u.5 coexpression data)

CoexMap"7492773"


ppoLOC7492773 | Entrez gene ID : 7492773    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 2 3 3 1 1 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (718 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (68 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4002 genes)  IEA  
Protein XP_002320859.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 2,  cyto_mito 1  (predict for XP_002320859.3)
Subcellular
localization
TargetP
chlo 6,  mito 3  (predict for XP_002320859.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7492773

.
ppo-r.4
for
7492773

.
ppo-u.5
for
7457393

.
gma-u.5
for
100795739

.
gma-u.5
for
100799999

.
mtr-u.5
for
25500711

.
mtr-u.5
for
25500710

.
mtr-u.5
for
25500712

.
ath-u.5
for
PDE340

.
ath-u.5
for
STRS2

.
ath-u.5
for
AT5G63630

.
vvi-u.5
for
100258444

.
sly-u.5
for
101245996

.
osa-u.5
for
4326614

.
osa-u.5
for
4326615

.
osa-u.5
for
4341186

.
zma-u.5
for
103638522

.
zma-u.5
for
103651490

.
zma-u.5
for
100279341

.


Ortholog ID: 2753
Species ath ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot cit cit bdi bdi nta nta
Symbol PDE340 STRS2 LOC100795739 LOC100799999 LOC101245996 LOC4341186 LOC4326614 LOC100279341 LOC103651490 LOC103847174 LOC103847175 LOC100258444 LOC7457393 LOC7492773 LOC25500710 LOC25500711 LOC123156504 LOC123065441 LOC123407193 LOC123443891 LOC107909798 LOC107923895 LOC125581627 LOC125579080 CHLRE_16g661900v5 CHLRE_16g662000v5 LOC8084836 LOC8054392 LOC102605904 LOC102616648 LOC127901017 LOC100831244 LOC100845683 LOC107780767 LOC107760327
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein DEA(D/H)-box RNA helicase family protein DEAD-box ATP-dependent RNA helicase 31 DEAD-box ATP-dependent RNA helicase 31 DEAD-box ATP-dependent RNA helicase 31-like DEAD-box ATP-dependent RNA helicase 31-like DEAD-box ATP-dependent RNA helicase 25-like uncharacterized LOC100279341 DEAD-box ATP-dependent RNA helicase 25 DEAD-box ATP-dependent RNA helicase 25 DEAD-box ATP-dependent RNA helicase 26 DEAD-box ATP-dependent RNA helicase 31 DEAD-box ATP-dependent RNA helicase 31 DEAD-box ATP-dependent RNA helicase 31 DEAD-box ATP-dependent RNA helicase 31 DEAD-box ATP-dependent RNA helicase 31 DEAD-box ATP-dependent RNA helicase 31 DEAD-box ATP-dependent RNA helicase 26 DEAD-box ATP-dependent RNA helicase 31 DEAD-box ATP-dependent RNA helicase 25-like DEAD-box ATP-dependent RNA helicase 31 DEAD-box ATP-dependent RNA helicase 31 DEAD-box ATP-dependent RNA helicase 25-like DEAD-box ATP-dependent RNA helicase 26-like uncharacterized protein uncharacterized protein DEAD-box ATP-dependent RNA helicase 26 DEAD-box ATP-dependent RNA helicase 25 DEAD-box ATP-dependent RNA helicase 31-like DEAD-box ATP-dependent RNA helicase 31 DEAD-box ATP-dependent RNA helicase 31-like DEAD-box ATP-dependent RNA helicase 25 DEAD-box ATP-dependent RNA helicase 26 DEAD-box ATP-dependent RNA helicase 31 DEAD-box ATP-dependent RNA helicase 31
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00230 Purine metabolism 3
mtr00670 One carbon pool by folate 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr00230 Purine metabolism 2
mtr00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03018 RNA degradation 2
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 3
bna00450 Selenocompound metabolism 3
bna00970 Aminoacyl-tRNA biosynthesis 3
bna00300 Lysine biosynthesis 2
bna00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 7
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830762 830763 100795739 100799999 101245996 4341186 4326614 100279341 103651490 103847174 103847175 100258444 7457393 7492773 25500710 25500711 123156504 123065441 123407193 123443891 107909798 107923895 125581627 125579080 5723434 5723507 8084836 8054392 102605904 102616648 127901017 100831244 100845683 107780767 107760327
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