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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7493402   cytochrome c oxidase subunit 6B-like protein new16 
 ppo-r.4   7493402   cytochrome c oxidase subunit 6B-like protein new16 
 ppo-m.4   7493402   cytochrome c oxidase subunit 6B-like protein new16 
 ppo-u.5   7465951   cytochrome c oxidase subunit 6B-like protein new16 
 gma-u.5   100780570   uncharacterized LOC100780570 
 mtr-u.5   11437300   uncharacterized LOC11437300 
 ath-u.5   AT5G58005   Cytochrome c oxidase, subunit Vib family protein 
 vvi-u.5   100255296   uncharacterized LOC100255296 
 sly-u.5   101263329   uncharacterized LOC101263329 
 sly-u.5   101244345   uncharacterized LOC101244345 
 osa-u.5   4345688   uncharacterized LOC4345688 
 zma-u.5   100276300   Cytochrome c oxidase subunit Vib family protein 

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Top 50 coexpressed genes to 7493402 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7493402 (ppo-u.5 coexpression data)

CoexMap"7493402"


ppoLOC7493402 | Entrez gene ID : 7493402    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0045277 [list] [network] respiratory chain complex IV  (5 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (675 genes)  IEA  
GO MF
Protein XP_002324549.1 [sequence] [blastp]
XP_006372124.1 [sequence] [blastp]
XP_024445825.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 2,  nucl 1  (predict for XP_002324549.1)
mito 6,  chlo 4  (predict for XP_006372124.1)
mito 5,  nucl 4,  chlo 1,  cyto 1  (predict for XP_024445825.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002324549.1)
other 7  (predict for XP_006372124.1)
other 7  (predict for XP_024445825.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7493402

.
ppo-r.4
for
7493402

.
ppo-m.4
for
7493402

.
ppo-u.5
for
7465951

.
gma-u.5
for
100780570

.
mtr-u.5
for
11437300

.
ath-u.5
for
AT5G58005

.
vvi-u.5
for
100255296

.
sly-u.5
for
101263329

.
sly-u.5
for
101244345

.
osa-u.5
for
4345688

.
zma-u.5
for
100276300

.


Ortholog ID: 7767
Species ath gma sly sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT5G58005 LOC100780570 LOC101244345 LOC101263329 LOC4345688 LOC100276300 LOC103856718 LOC100255296 LOC7493402 LOC7465951 LOC11437300 LOC123165698 LOC123151659 LOC123411946 LOC107906908 LOC107958931 LOC106385194 LOC125599337 CHLRE_10g466000v5 LOC8080607 LOC102592534 LOC102591353 LOC102625714 LOC100833101 LOC107786851 LOC107769447
Function* Cytochrome c oxidase, subunit Vib family protein uncharacterized LOC100780570 uncharacterized LOC101244345 uncharacterized LOC101263329 uncharacterized LOC4345688 Cytochrome c oxidase subunit Vib family protein cytochrome c oxidase assembly factor 6 uncharacterized LOC100255296 cytochrome c oxidase subunit 6B-like protein new16 cytochrome c oxidase subunit 6B-like protein new16 uncharacterized LOC11437300 uncharacterized LOC123165698 uncharacterized LOC123151659 uncharacterized LOC123411946 cytochrome c oxidase assembly factor 6 cytochrome c oxidase assembly factor 6 cytochrome c oxidase assembly factor 6-like cytochrome c oxidase assembly factor 6-like uncharacterized protein uncharacterized LOC8080607 uncharacterized LOC102592534 uncharacterized LOC102591353 cytochrome c oxidase assembly factor 6 uncharacterized LOC100833101 uncharacterized LOC107786851 uncharacterized LOC107769447
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 3
sly04141 Protein processing in endoplasmic reticulum 2
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 5
osa00020 Citrate cycle (TCA cycle) 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 7
zma04141 Protein processing in endoplasmic reticulum 4
zma03420 Nucleotide excision repair 3
zma04120 Ubiquitin mediated proteolysis 3
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra03083 Polycomb repressive complex 3
bra04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 3
ppo03018 RNA degradation 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 8
hvu00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
ghi03083 Polycomb repressive complex 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 9
ghi03083 Polycomb repressive complex 5
ghi04141 Protein processing in endoplasmic reticulum 5
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 3
bna04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 3
bna00620 Pyruvate metabolism 3
bna04120 Ubiquitin mediated proteolysis 3
bna00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 4
sbi04141 Protein processing in endoplasmic reticulum 4
sbi03083 Polycomb repressive complex 3
sbi03018 RNA degradation 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 4
sot03020 RNA polymerase 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
cit00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 3
bdi04120 Ubiquitin mediated proteolysis 3
bdi04141 Protein processing in endoplasmic reticulum 3
bdi00190 Oxidative phosphorylation 3
bdi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835912 100780570 101244345 101263329 4345688 100276300 103856718 100255296 7493402 7465951 11437300 123165698 123151659 123411946 107906908 107958931 106385194 125599337 5724191 8080607 102592534 102591353 102625714 100833101 107786851 107769447
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