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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7493587   uncharacterized LOC7493587 
 ppo-r.4   7493587   uncharacterized LOC7493587 
 ppo-m.4   7493587   uncharacterized LOC7493587 
 gma-u.5   100803449   tetratricopeptide repeat protein 27 
 gma-u.5   100782837   uncharacterized LOC100782837 
 mtr-u.5   11424027   tetratricopeptide repeat protein 27 homolog 
 ath-u.5   AT5G17270   Protein prenylyltransferase superfamily protein 
 ath-u.5   AT5G37130   Protein prenylyltransferase superfamily protein 
 vvi-u.5   100252760   uncharacterized LOC100252760 
 sly-u.5   101264229   uncharacterized LOC101264229 
 osa-u.5   4343142   uncharacterized LOC4343142 
 zma-u.5   103647292   tetratricopeptide repeat protein 27 homolog 

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Top 50 coexpressed genes to 7493587 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7493587 (ppo-u.5 coexpression data)

CoexMap"7493587"


ppoLOC7493587 | Entrez gene ID : 7493587    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024455789.2 [sequence] [blastp]
XP_024455791.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 2,  plas 2,  chlo_mito 2,  nucl_plas 2  (predict for XP_024455789.2)
nucl 4,  cyto 3,  vacu 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_024455791.2)
Subcellular
localization
TargetP
mito 2  (predict for XP_024455789.2)
other 9  (predict for XP_024455791.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7493587

.
ppo-r.4
for
7493587

.
ppo-m.4
for
7493587

.
gma-u.5
for
100803449

.
gma-u.5
for
100782837

.
mtr-u.5
for
11424027

.
ath-u.5
for
AT5G17270

.
ath-u.5
for
AT5G37130

.
vvi-u.5
for
100252760

.
sly-u.5
for
101264229

.
osa-u.5
for
4343142

.
zma-u.5
for
103647292

.


Ortholog ID: 6970
Species ath ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit cit bdi nta nta
Symbol AT5G17270 AT5G37130 LOC100803449 LOC100782837 LOC101264229 LOC4343142 LOC103647292 LOC103846256 LOC100252760 LOC7493587 LOC11424027 LOC123097648 LOC123092310 LOC123448795 LOC123408861 LOC107922433 LOC107917895 LOC106387716 LOC106371958 CHLRE_09g401700v5 LOC8061646 LOC102588970 LOC102614077 LOC127898709 LOC100822694 LOC107799860 LOC107830264
Function* Protein prenylyltransferase superfamily protein Protein prenylyltransferase superfamily protein tetratricopeptide repeat protein 27 uncharacterized LOC100782837 uncharacterized LOC101264229 uncharacterized LOC4343142 tetratricopeptide repeat protein 27 homolog tetratricopeptide repeat protein 27 homolog uncharacterized LOC100252760 uncharacterized LOC7493587 tetratricopeptide repeat protein 27 homolog tetratricopeptide repeat protein 27 homolog tetratricopeptide repeat protein 27 homolog tetratricopeptide repeat protein 27 homolog tetratricopeptide repeat protein 27 homolog tetratricopeptide repeat protein 27 homolog tetratricopeptide repeat protein 27 homolog tetratricopeptide repeat protein 27 homolog tetratricopeptide repeat protein 27 homolog uncharacterized protein tetratricopeptide repeat protein 27 homolog tetratricopeptide repeat protein 27 homolog uncharacterized LOC102614077 uncharacterized LOC127898709 tetratricopeptide repeat protein 27 homolog uncharacterized LOC107799860 uncharacterized LOC107830264
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
ath03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 6
zma03015 mRNA surveillance pathway 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
hvu03018 RNA degradation 2
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03020 RNA polymerase 4
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03020 RNA polymerase 4
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03020 RNA polymerase 3
bdi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831592 833685 100803449 100782837 101264229 4343142 103647292 103846256 100252760 7493587 11424027 123097648 123092310 123448795 123408861 107922433 107917895 106387716 106371958 66054798 8061646 102588970 102614077 127898709 100822694 107799860 107830264
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