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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7494080   beta-amylase 2, chloroplastic 
 ppo-r.4   7494080   beta-amylase 2, chloroplastic 
 ppo-m.4   7494080   beta-amylase 2, chloroplastic 
 ppo-u.5   7496966   beta-amylase 7-like 
 ppo-u.5   7461768   beta-amylase 7 
 gma-u.5   100812659   beta-amylase 7 
 gma-u.5   100805560   beta-amylase 7 
 mtr-u.5   25498898   beta-amylase 7 
 ath-u.5   BAM7   beta-amylase 7 
 ath-u.5   BAM2   beta-amylase 2 
 vvi-u.5   100246489   beta-amylase 7 
 vvi-u.5   100255167   beta-amylase 2, chloroplastic 
 sly-u.5   101248715   beta-amylase 7 
 osa-u.5   4347903   beta-amylase 2, chloroplastic 
 zma-u.5   100278364   uncharacterized LOC100278364 

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Top 50 coexpressed genes to 7494080 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7494080 (ppo-u.5 coexpression data)

CoexMap"7494080"


ppoLOC7494080 | Entrez gene ID : 7494080    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 2 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00500 [list] [network] Starch and sucrose metabolism (188 genes)
GO BP
GO:0000272 [list] [network] polysaccharide catabolic process  (46 genes)  IEA  
GO CC
GO MF
GO:0016161 [list] [network] beta-amylase activity  (12 genes)  IEA  
Protein XP_002320794.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002320794.2)
Subcellular
localization
TargetP
chlo 7,  scret 3  (predict for XP_002320794.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7494080

.
ppo-r.4
for
7494080

.
ppo-m.4
for
7494080

.
ppo-u.5
for
7496966

.
ppo-u.5
for
7461768

.
gma-u.5
for
100812659

.
gma-u.5
for
100805560

.
mtr-u.5
for
25498898

.
ath-u.5
for
BAM7

.
ath-u.5
for
BAM2

.
vvi-u.5
for
100246489

.
vvi-u.5
for
100255167

.
sly-u.5
for
101248715

.
osa-u.5
for
4347903

.
zma-u.5
for
100278364

.


Ortholog ID: 4708
Species ath ath gma gma sly osa zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit cit bdi bdi nta nta
Symbol BAM2 BAM7 LOC100812659 LOC100805560 LOC101248715 LOC4347903 LOC100278364 LOC103866930 LOC103836914 LOC100255167 LOC100246489 LOC7496966 LOC7461768 LOC25498898 LOC123095580 LOC123087407 LOC123446826 LOC107924511 LOC107911516 LOC106365522 LOC106434958 LOC8062554 LOC102593066 LOC127901035 LOC127901044 LOC100824427 LOC100834182 LOC107827210 LOC107791629
Function* beta-amylase 2 beta-amylase 7 beta-amylase 7 beta-amylase 7 beta-amylase 7 beta-amylase 2, chloroplastic uncharacterized LOC100278364 beta-amylase 7 beta-amylase 2, chloroplastic beta-amylase 2, chloroplastic beta-amylase 7 beta-amylase 7-like beta-amylase 7 beta-amylase 7 beta-amylase 2, chloroplastic beta-amylase 2, chloroplastic beta-amylase 2, chloroplastic-like beta-amylase 7 beta-amylase 7 beta-amylase 2, chloroplastic beta-amylase 2, chloroplastic-like beta-amylase 2, chloroplastic beta-amylase 7 beta-amylase 7-like beta-amylase 2, chloroplastic-like beta-amylase 2, chloroplastic beta-amylase 2, chloroplastic-like beta-amylase 2, chloroplastic-like beta-amylase 7-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 8
ath00520 Amino sugar and nucleotide sugar metabolism 3
ath01250 Biosynthesis of nucleotide sugars 3
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa00860 Porphyrin metabolism 2
osa00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma04144 Endocytosis 2
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo00500 Starch and sucrose metabolism 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
ppo03250 Viral life cycle - HIV-1 2
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00770 Pantothenate and CoA biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit01230 Biosynthesis of amino acids 3
cit04144 Endocytosis 2
cit00500 Starch and sucrose metabolism 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
cit00900 Terpenoid backbone biosynthesis 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
bdi00500 Starch and sucrose metabolism 2
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta03040 Spliceosome 3
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827959 819196 100812659 100805560 101248715 4347903 100278364 103866930 103836914 100255167 100246489 7496966 7461768 25498898 123095580 123087407 123446826 107924511 107911516 106365522 106434958 8062554 102593066 127901035 127901044 100824427 100834182 107827210 107791629
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