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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7457390   transcription factor CPC 
 ppo-u.5   18105511   MYB-like transcription factor ETC3 
 ppo-u.5   7489814   transcription factor TRY 
 gma-u.5   100814431   transcription factor CPC-like 
 mtr-u.5   11432217   transcription factor TRY 
 ath-u.5   CPC   Homeodomain-like superfamily protein 
 vvi-u.5   100233044   transcription factor TRY 
 vvi-u.5   100258469   transcription factor TRY-like 
 zma-u.5   100278335   MYB-like transcription factor ETC3 

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Top 50 coexpressed genes to 7457390 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7457390 (ppo-u.5 coexpression data)

CoexMap"7494140"


ppoLOC7494140 | Entrez gene ID : 7494140    
Species ppo gma mtr ath vvi zma sly sbi nta bra osa cre cit hvu bdi sot tae bna ghi
Paralog 3 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030154 [list] [network] cell differentiation  (94 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (442 genes)  IEA  
Protein XP_002320853.1 [sequence] [blastp]
XP_024440697.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto_nucl 4,  extr 1  (predict for XP_002320853.1)
nucl 6,  cyto_nucl 4,  mito 2  (predict for XP_024440697.1)
Subcellular
localization
TargetP
other 7  (predict for XP_002320853.1)
other 3  (predict for XP_024440697.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7457390

.
ppo-u.5
for
18105511

.
ppo-u.5
for
7489814

.
gma-u.5
for
100814431

.
mtr-u.5
for
11432217

.
ath-u.5
for
CPC

.
vvi-u.5
for
100233044

.
vvi-u.5
for
100258469

.
zma-u.5
for
100278335

.


Ortholog ID: 1610
Species ath gma zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi sbi cit cit
Symbol CPC LOC100814431 LOC100278335 LOC103852047 LOC103853331 LOC100233044 LOC100258469 LOC7489814 LOC7457390 LOC11432217 LOC123061511 LOC123078589 LOC123443899 LOC107923100 LOC107909796 LOC8084840 LOC127900933 LOC102610227
Function* Homeodomain-like superfamily protein transcription factor CPC-like MYB-like transcription factor ETC3 transcription factor TRY MYB-like transcription factor ETC3 transcription factor TRY transcription factor TRY-like transcription factor TRY transcription factor CPC transcription factor TRY MYB-like transcription factor TCL2 MYB-like transcription factor TCL2 MYB-like transcription factor TCL2 transcription factor CPC transcription factor CPC MYB-like transcription factor ETC3 transcription factor CPC-like MYB-like transcription factor ETC3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00942 Anthocyanin biosynthesis 2
ath00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 5
ppo04517 IgSF CAM signaling 3
ppo04814 Motor proteins 3
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00943 Isoflavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00360 Phenylalanine metabolism 2
ghi00650 Butanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00360 Phenylalanine metabolism 2
ghi00650 Butanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 4
sbi00100 Steroid biosynthesis 2
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819249 100814431 100278335 103852047 103853331 100233044 100258469 7489814 7457390 11432217 123061511 123078589 123443899 107923100 107909796 8084840 127900933 102610227
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