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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7494142   rhodanese-like domain-containing protein 4, chloroplastic 
 ppo-r.4   7494142   rhodanese-like domain-containing protein 4, chloroplastic 
 ppo-m.4   7494142   rhodanese-like domain-containing protein 4, chloroplastic 
 ppo-u.5   7497240   rhodanese-like domain-containing protein 4, chloroplastic 
 gma-u.5   100810796   rhodanese-like domain-containing protein 4, chloroplastic 
 gma-u.5   100784482   rhodanese-like domain-containing protein 4, chloroplastic 
 mtr-u.5   25500720   rhodanese-like domain-containing protein 4, chloroplastic 
 ath-u.5   TROL   thylakoid rhodanese-like protein 
 bra-r.6   103858829   rhodanese-like domain-containing protein 4, chloroplastic 
 bra-r.6   103836866   rhodanese-like domain-containing protein 4, chloroplastic 
 vvi-u.5   100255153   rhodanese-like domain-containing protein 4, chloroplastic 
 ghi-r.1   107948185   rhodanese-like domain-containing protein 4, chloroplastic 
 ghi-r.1   107933531   rhodanese-like domain-containing protein 4, chloroplastic 
 ghi-r.1   107900941   rhodanese-like domain-containing protein 4, chloroplastic 
 bna-r.1   106365641   rhodanese-like domain-containing protein 4, chloroplastic 
 bna-r.1   106438629   rhodanese-like domain-containing protein 4, chloroplastic 
 bna-r.1   125593231   rhodanese-like domain-containing protein 4, chloroplastic 
 cit-r.1   127901020   rhodanese-like domain-containing protein 4, chloroplastic 
 cit-r.1   102615288   rhodanese-like domain-containing protein 4, chloroplastic 
 sly-u.5   104649438   rhodanese-like domain-containing protein 4, chloroplastic 
 sly-u.5   101262961   rhodanese-like domain-containing protein 4, chloroplastic 
 sot-r.1   102603666   rhodanese-like domain-containing protein 4, chloroplastic 
 sot-r.1   102604510   rhodanese-like domain-containing protein 4, chloroplastic 
 nta-r.1   107777965   rhodanese-like domain-containing protein 4, chloroplastic 
 nta-r.1   107790570   rhodanese-like domain-containing protein 4, chloroplastic 
 nta-r.1   107793804   rhodanese-like domain-containing protein 4, chloroplastic 
 osa-u.5   4328925   protein THYLAKOID RHODANESE-LIKE, chloroplastic-like 
 zma-u.5   109940444   protein THYLAKOID RHODANESE-LIKE, chloroplastic 
 zma-u.5   100192599   Rhodanese-like domain-containing protein 4 chloroplastic 
 tae-r.2   123063127   protein THYLAKOID RHODANESE-LIKE, chloroplastic 
 tae-r.2   123080319   protein THYLAKOID RHODANESE-LIKE, chloroplastic 
 tae-r.2   123072039   protein THYLAKOID RHODANESE-LIKE, chloroplastic 
 hvu-r.1   123445254   protein THYLAKOID RHODANESE-LIKE, chloroplastic 
 sbi-r.1   8059050   rhodanese-like domain-containing protein 4, chloroplastic 
 bdi-r.1   100831350   protein THYLAKOID RHODANESE-LIKE, chloroplastic 
 cre-r.1   CHLRE_09g416850v5   uncharacterized protein 
 cre-r.1   CHLRE_12g515950v5   uncharacterized protein 

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Top 50 coexpressed genes to 7494142 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7494142 (ppo-u.5 coexpression data)

CoexMap"7494142"


ppoLOC7494142 | Entrez gene ID : 7494142    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 1 2 1 3 3 2 2 2 3 1 2 3 1 1 1 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_002320855.1 [sequence] [blastp]
XP_052303178.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl_plas 2,  nucl 1,  plas 1,  cyto 1,  mito 1,  golg 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_002320855.1)
chlo 4,  cyto 4,  nucl 1,  plas 1,  golg 1,  cysk_nucl 1,  golg_plas 1  (predict for XP_052303178.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_002320855.1)
chlo 9  (predict for XP_052303178.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7494142
ppo-r.4
for
7494142
ppo-m.4
for
7494142
ppo-u.5
for
7497240
gma-u.5
for
100810796
gma-u.5
for
100784482
mtr-u.5
for
25500720
ath-u.5
for
TROL
bra-r.6
for
103858829
bra-r.6
for
103836866
vvi-u.5
for
100255153
ghi-r.1
for
107948185
ghi-r.1
for
107933531
ghi-r.1
for
107900941
bna-r.1
for
106365641
bna-r.1
for
106438629
bna-r.1
for
125593231
cit-r.1
for
127901020
cit-r.1
for
102615288
sly-u.5
for
104649438
sly-u.5
for
101262961
sot-r.1
for
102603666
sot-r.1
for
102604510
nta-r.1
for
107777965
nta-r.1
for
107790570
nta-r.1
for
107793804
osa-u.5
for
4328925
zma-u.5
for
109940444
zma-u.5
for
100192599
tae-r.2
for
123063127
tae-r.2
for
123080319
tae-r.2
for
123072039
hvu-r.1
for
123445254
sbi-r.1
for
8059050
bdi-r.1
for
100831350
cre-r.1
for
CHLRE_09g416850v5
cre-r.1
for
CHLRE_12g515950v5


Ortholog ID: 5548
Species ppo ppo gma gma mtr ath bra bra vvi ghi ghi ghi bna bna bna cit cit sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre cre
Symbol LOC7494142 LOC7497240 LOC100810796 LOC100784482 LOC25500720 TROL LOC103858829 LOC103836866 LOC100255153 LOC107948185 LOC107933531 LOC107900941 LOC106365641 LOC125593231 LOC106388753 LOC127901020 LOC102615288 LOC104649438 LOC101262961 LOC102603666 LOC102604510 LOC107777965 LOC107793804 LOC107820359 LOC4328925 LOC109940444 LOC100192599 LOC123063127 LOC123080319 LOC123072039 LOC123445254 LOC8059050 LOC100831350 CHLRE_09g416850v5 CHLRE_12g515950v5
Function* rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic thylakoid rhodanese-like protein rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic protein THYLAKOID RHODANESE-LIKE, chloroplastic-like protein THYLAKOID RHODANESE-LIKE, chloroplastic Rhodanese-like domain-containing protein 4 chloroplastic protein THYLAKOID RHODANESE-LIKE, chloroplastic protein THYLAKOID RHODANESE-LIKE, chloroplastic protein THYLAKOID RHODANESE-LIKE, chloroplastic protein THYLAKOID RHODANESE-LIKE, chloroplastic rhodanese-like domain-containing protein 4, chloroplastic protein THYLAKOID RHODANESE-LIKE, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 5
ppo00710 Carbon fixation by Calvin cycle 4
ppo01230 Biosynthesis of amino acids 3
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 8
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 8
gma00195 Photosynthesis 4
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 5
mtr00190 Oxidative phosphorylation 2
mtr00195 Photosynthesis 2
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 6
ath00196 Photosynthesis - antenna proteins 4
ath00860 Porphyrin metabolism 4
ath00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi01240 Biosynthesis of cofactors 2
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 6
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00740 Riboflavin metabolism 2
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00740 Riboflavin metabolism 2
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00740 Riboflavin metabolism 2
bna00790 Folate biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00630 Glyoxylate and dicarboxylate metabolism 3
cit00380 Tryptophan metabolism 2
cit00260 Glycine, serine and threonine metabolism 2
cit00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00630 Glyoxylate and dicarboxylate metabolism 3
cit00380 Tryptophan metabolism 2
cit00260 Glycine, serine and threonine metabolism 2
cit00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 8
sly00710 Carbon fixation by Calvin cycle 5
sly00195 Photosynthesis 4
sly00630 Glyoxylate and dicarboxylate metabolism 3
sly00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 8
sly03010 Ribosome 3
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 6
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot00710 Carbon fixation by Calvin cycle 3
sot01230 Biosynthesis of amino acids 3
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00740 Riboflavin metabolism 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 8
nta00196 Photosynthesis - antenna proteins 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 8
nta00196 Photosynthesis - antenna proteins 2
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 3
osa00195 Photosynthesis 3
osa00710 Carbon fixation by Calvin cycle 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 4
hvu00195 Photosynthesis 2
hvu00053 Ascorbate and aldarate metabolism 2
hvu00480 Glutathione metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi00710 Carbon fixation by Calvin cycle 3
bdi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 5
cre00620 Pyruvate metabolism 4
cre00061 Fatty acid biosynthesis 4
cre01212 Fatty acid metabolism 4
cre01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7494142 7497240 100810796 100784482 25500720 827921 103858829 103836866 100255153 107948185 107933531 107900941 106365641 125593231 106388753 127901020 102615288 104649438 101262961 102603666 102604510 107777965 107793804 107820359 4328925 109940444 100192599 123063127 123080319 123072039 123445254 8059050 100831350 5722396 5728752
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