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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7494518   glutamate decarboxylase 1 
 ppo-r.4   7494518   glutamate decarboxylase 1 
 ppo-u.5   18106489   glutamate decarboxylase 
 gma-u.5   100796475   glutamate decarboxylase 
 gma-u.5   100796533   glutamate decarboxylase 
 gma-u.5   100787167   glutamate decarboxylase 1 
 mtr-u.5   11433639   glutamate decarboxylase 1 
 mtr-u.5   11408278   glutamate decarboxylase 1 
 mtr-u.5   25496687   glutamate decarboxylase 
 ath-u.5   GAD   glutamate decarboxylase 
 ath-u.5   GAD4   glutamate decarboxylase 4 
 vvi-u.5   100266215   glutamate decarboxylase 1 
 vvi-u.5   100265999   glutamate decarboxylase 
 vvi-u.5   100261008   glutamate decarboxylase 4 
 sly-u.5   GAD3   glutamate decarboxylase isoform3 
 sly-u.5   GAD2   glutamate decarboxylase isoform2 
 sly-u.5   101251185   glutamate decarboxylase-like 
 osa-u.5   4345787   glutamate decarboxylase 1 
 osa-u.5   4332184   glutamate decarboxylase 1 
 osa-u.5   4333932   glutamate decarboxylase 1 
 zma-u.5   100273302   Pyridoxal phosphate (PLP)-dependent transferase superfamily protein 
 zma-u.5   100191549   uncharacterized LOC100191549 
 zma-u.5   100284551   uncharacterized LOC100284551 

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Top 50 coexpressed genes to 7494518 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7494518 (ppo-u.5 coexpression data)

CoexMap"7494518"


ppoLOC7494518 | Entrez gene ID : 7494518    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 3 2 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00250 [list] [network] Alanine, aspartate and glutamate metabolism (61 genes)
pop00410 [list] [network] beta-Alanine metabolism (70 genes)
pop00430 [list] [network] Taurine and hypotaurine metabolism (16 genes)
pop00650 [list] [network] Butanoate metabolism (27 genes)
GO BP
GO:0006538 [list] [network] L-glutamate catabolic process  (10 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (1141 genes)  IEA  
GO MF
GO:0004351 [list] [network] glutamate decarboxylase activity  (6 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (105 genes)  IEA  
Protein XP_002305927.1 [sequence] [blastp]
XP_052308427.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9  (predict for XP_002305927.1)
cyto 9  (predict for XP_052308427.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_002305927.1)
chlo 4  (predict for XP_052308427.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7494518

.
ppo-r.4
for
7494518

.
ppo-u.5
for
18106489

.
gma-u.5
for
100796475

.
gma-u.5
for
100796533

.
gma-u.5
for
100787167

.
mtr-u.5
for
11433639

.
mtr-u.5
for
11408278

.
mtr-u.5
for
25496687

.
ath-u.5
for
GAD

.
ath-u.5
for
GAD4

.
vvi-u.5
for
100266215

.
vvi-u.5
for
100265999

.
vvi-u.5
for
100261008

.
sly-u.5
for
GAD3

.
sly-u.5
for
GAD2

.
sly-u.5
for
101251185

.
osa-u.5
for
4345787

.
osa-u.5
for
4332184

.
osa-u.5
for
4333932

.
zma-u.5
for
100273302

.
zma-u.5
for
100191549

.
zma-u.5
for
100284551

.


Ortholog ID: 523
Species ath gma gma sly sly osa osa zma zma bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol GAD LOC100796475 LOC100796533 GAD2 GAD3 LOC4335973 LOC4335977 LOC100191549 LOC100284551 LOC103831077 LOC100265999 LOC100261008 LOC7485189 LOC120577330 LOC25496687 LOC123075872 LOC123066916 LOC123447564 LOC123441085 LOC121224454 LOC107948303 LOC106426880 LOC106387720 LOC8065836 LOC8063364 LOC102581388 LOC102594980 LOC102612842 LOC102611084 LOC100831497 LOC100827187 LOC107819266 LOC107804984
Function* glutamate decarboxylase glutamate decarboxylase glutamate decarboxylase glutamate decarboxylase isoform2 glutamate decarboxylase isoform3 glutamate decarboxylase glutamate decarboxylase 4 uncharacterized LOC100191549 uncharacterized LOC100284551 glutamate decarboxylase 2 glutamate decarboxylase glutamate decarboxylase 4 glutamate decarboxylase glutamate decarboxylase 4 glutamate decarboxylase glutamate decarboxylase glutamate decarboxylase glutamate decarboxylase 1-like glutamate decarboxylase-like glutamate decarboxylase glutamate decarboxylase 4 glutamate decarboxylase 2 glutamate decarboxylase 1 glutamate decarboxylase glutamate decarboxylase 1 glutamate decarboxylase glutamate decarboxylase-like glutamate decarboxylase-like glutamate decarboxylase 5-like glutamate decarboxylase glutamate decarboxylase glutamate decarboxylase 4-like glutamate decarboxylase-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 2
ath00940 Phenylpropanoid biosynthesis 2
ath00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00410 beta-Alanine metabolism 2
gma00430 Taurine and hypotaurine metabolism 2
gma00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00410 beta-Alanine metabolism 2
gma00430 Taurine and hypotaurine metabolism 2
gma00650 Butanoate metabolism 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00250 Alanine, aspartate and glutamate metabolism 2
zma00410 beta-Alanine metabolism 2
zma00430 Taurine and hypotaurine metabolism 2
zma00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00250 Alanine, aspartate and glutamate metabolism 2
zma00410 beta-Alanine metabolism 2
zma00430 Taurine and hypotaurine metabolism 2
zma00650 Butanoate metabolism 2
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00410 beta-Alanine metabolism 3
bra00190 Oxidative phosphorylation 3
bra04145 Phagosome 3
bra00330 Arginine and proline metabolism 2
bra00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
vvi00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
mtr00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00410 beta-Alanine metabolism 3
tae00430 Taurine and hypotaurine metabolism 3
tae00650 Butanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00410 beta-Alanine metabolism 3
tae00430 Taurine and hypotaurine metabolism 3
tae00650 Butanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00430 Taurine and hypotaurine metabolism 2
ghi00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 6
ghi00410 beta-Alanine metabolism 6
ghi00430 Taurine and hypotaurine metabolism 6
ghi00650 Butanoate metabolism 6
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 6
bna00650 Butanoate metabolism 6
bna00410 beta-Alanine metabolism 4
bna00430 Taurine and hypotaurine metabolism 4
bna00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00250 Alanine, aspartate and glutamate metabolism 7
bna00410 beta-Alanine metabolism 7
bna00430 Taurine and hypotaurine metabolism 7
bna00650 Butanoate metabolism 7
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00250 Alanine, aspartate and glutamate metabolism 4
sbi00410 beta-Alanine metabolism 4
sbi00430 Taurine and hypotaurine metabolism 4
sbi00650 Butanoate metabolism 4
sbi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00250 Alanine, aspartate and glutamate metabolism 4
sbi00410 beta-Alanine metabolism 4
sbi00430 Taurine and hypotaurine metabolism 4
sbi00650 Butanoate metabolism 4
sbi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00250 Alanine, aspartate and glutamate metabolism 2
sot00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00250 Alanine, aspartate and glutamate metabolism 2
sot00410 beta-Alanine metabolism 2
sot00430 Taurine and hypotaurine metabolism 2
sot00650 Butanoate metabolism 2
sot00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 3
cit04120 Ubiquitin mediated proteolysis 3
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00250 Alanine, aspartate and glutamate metabolism 4
bdi00410 beta-Alanine metabolism 4
bdi00430 Taurine and hypotaurine metabolism 4
bdi00650 Butanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 4
bdi04626 Plant-pathogen interaction 2
bdi00564 Glycerophospholipid metabolism 2
bdi00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00410 beta-Alanine metabolism 2
nta00430 Taurine and hypotaurine metabolism 2
nta00650 Butanoate metabolism 2
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00250 Alanine, aspartate and glutamate metabolism 4
nta00410 beta-Alanine metabolism 4
nta00430 Taurine and hypotaurine metabolism 4
nta00650 Butanoate metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831599 100796475 100796533 100147722 100147723 4335973 4335977 100191549 100284551 103831077 100265999 100261008 7485189 120577330 25496687 123075872 123066916 123447564 123441085 121224454 107948303 106426880 106387720 8065836 8063364 102581388 102594980 102612842 102611084 100831497 100827187 107819266 107804984
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