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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7494544   allene oxide cyclase, chloroplastic 
 ppo-r.4   7494544   allene oxide cyclase, chloroplastic 
 ppo-m.4   7494544   allene oxide cyclase, chloroplastic 
 gma-u.5   AOC5   allene oxide cyclase 5 
 gma-u.5   AOC4   allene oxide cyclase 3, chloroplastic-like 
 gma-u.5   AOC1   allene oxide cyclase 4, chloroplastic-like 
 mtr-u.5   25495598   allene oxide cyclase, chloroplastic 
 mtr-u.5   25499834   allene oxide cyclase, chloroplastic 
 ath-u.5   AOC1   allene oxide cyclase 1 
 ath-u.5   AOC2   allene oxide cyclase 2 
 ath-u.5   AOC3   allene oxide cyclase 3 
 vvi-u.5   100232990   allene oxide cyclase 
 sly-u.5   AOC   allene oxide cyclase 
 osa-u.5   4333201   allene oxide cyclase, chloroplastic-like 
 zma-u.5   aoc2   allene-oxide cyclase2 
 zma-u.5   aoc1   allene-oxide cyclase1 

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Top 50 coexpressed genes to 7494544 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7494544 (ppo-u.5 coexpression data)

CoexMap"7494544"


ppoLOC7494544 | Entrez gene ID : 7494544    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 2 3 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00592 [list] [network] alpha-Linolenic acid metabolism (75 genes)
GO BP
GO:0009695 [list] [network] jasmonic acid biosynthetic process  (10 genes)  IEA  
GO CC
GO MF
GO:0046423 [list] [network] allene-oxide cyclase activity  (3 genes)  IEA  
Protein XP_002305951.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_002305951.2)
Subcellular
localization
TargetP
chlo 8  (predict for XP_002305951.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7494544

.
ppo-r.4
for
7494544

.
ppo-m.4
for
7494544

.
gma-u.5
for
AOC5

.
gma-u.5
for
AOC4

.
gma-u.5
for
AOC1

.
mtr-u.5
for
25495598

.
mtr-u.5
for
25499834

.
ath-u.5
for
AOC1

.
ath-u.5
for
AOC2

.
ath-u.5
for
AOC3

.
vvi-u.5
for
100232990

.
sly-u.5
for
AOC

.
osa-u.5
for
4333201

.
zma-u.5
for
aoc2

.
zma-u.5
for
aoc1

.


Ortholog ID: 2342
Species ath ath gma gma sly osa zma zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit cit bdi nta nta
Symbol AOC4 AOC1 LOC100800036 AOC6 AOC LOC4333201 aoc1 aoc2 LOC103875352 LOC100232990 LOC7494544 LOC25495597 LOC25495598 LOC123128593 LOC123138464 LOC123403633 LOC121220211 LOC121202816 LOC106443552 LOC106416449 CHLRE_01g045200v5 LOC8063218 LOC102577822 LOC102622584 LOC102622874 LOC100829167 LOC107767576 LOC107768393
Function* allene oxide cyclase 4 allene oxide cyclase 1 allene oxide cyclase 4, chloroplastic-like allene oxide cyclase 4, chloroplastic-like allene oxide cyclase allene oxide cyclase, chloroplastic-like allene-oxide cyclase1 allene-oxide cyclase2 allene oxide cyclase 2, chloroplastic allene oxide cyclase allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic-like allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic allene oxide cyclase 2, chloroplastic allene oxide cyclase 2, chloroplastic uncharacterized protein allene oxide cyclase, chloroplastic allene oxide cyclase allene oxide cyclase, chloroplastic-like allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic allene oxide cyclase, chloroplastic allene oxide cyclase 4, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 3
ath00052 Galactose metabolism 2
ath00230 Purine metabolism 2
ath00480 Glutathione metabolism 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 3
gma00620 Pyruvate metabolism 3
gma00592 alpha-Linolenic acid metabolism 2
gma00040 Pentose and glucuronate interconversions 2
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00592 alpha-Linolenic acid metabolism 4
gma04075 Plant hormone signal transduction 3
gma00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 5
osa00592 alpha-Linolenic acid metabolism 4
osa00591 Linoleic acid metabolism 2
osa00564 Glycerophospholipid metabolism 2
osa00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 12
zma00270 Cysteine and methionine metabolism 8
zma00670 One carbon pool by folate 5
zma01240 Biosynthesis of cofactors 5
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 4
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
zma00670 One carbon pool by folate 2
zma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00592 alpha-Linolenic acid metabolism 3
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00592 alpha-Linolenic acid metabolism 4
ppo04075 Plant hormone signal transduction 4
ppo00410 beta-Alanine metabolism 2
ppo01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00592 alpha-Linolenic acid metabolism 12
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00592 alpha-Linolenic acid metabolism 12
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00592 alpha-Linolenic acid metabolism 4
hvu01240 Biosynthesis of cofactors 3
hvu00040 Pentose and glucuronate interconversions 2
hvu00053 Ascorbate and aldarate metabolism 2
hvu00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00592 alpha-Linolenic acid metabolism 8
bna04075 Plant hormone signal transduction 4
bna00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00592 alpha-Linolenic acid metabolism 8
bna00941 Flavonoid biosynthesis 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00592 alpha-Linolenic acid metabolism 4
sbi00591 Linoleic acid metabolism 4
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00592 alpha-Linolenic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit00592 alpha-Linolenic acid metabolism 3
cit04075 Plant hormone signal transduction 3
cit04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 5
cit01230 Biosynthesis of amino acids 3
cit04075 Plant hormone signal transduction 2
cit00010 Glycolysis / Gluconeogenesis 2
cit00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 3
bdi01230 Biosynthesis of amino acids 3
bdi00670 One carbon pool by folate 3
bdi00190 Oxidative phosphorylation 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
nta00592 alpha-Linolenic acid metabolism 4
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 4
nta04075 Plant hormone signal transduction 2
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837888 822167 100800036 100805194 544306 4333201 542151 100273356 103875352 100232990 7494544 25495597 25495598 123128593 123138464 123403633 121220211 121202816 106443552 106416449 5715654 8063218 102577822 102622584 102622874 100829167 107767576 107768393
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