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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7494582   protease Do-like 8, chloroplastic 
 ppo-r.4   7494582   protease Do-like 8, chloroplastic 
 ppo-m.4   7494582   protease Do-like 8, chloroplastic 
 gma-u.5   100804040   protease Do-like 8, chloroplastic 
 mtr-u.5   25495301   protease Do-like 8, chloroplastic 
 ath-u.5   DEG8   Trypsin family protein with PDZ domain-containing protein 
 vvi-u.5   100249197   protease Do-like 8, chloroplastic 
 sly-u.5   101267480   protease Do-like 8, chloroplastic 
 osa-u.5   9268615   protease Do-like 8, chloroplastic 
 zma-u.5   100272554   Protease Do-like 8 chloroplastic 

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Top 50 coexpressed genes to 7494582 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7494582 (ppo-u.5 coexpression data)

CoexMap"7494582"


ppoLOC7494582 | Entrez gene ID : 7494582    
Species ppo gma mtr ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006508 [list] [network] proteolysis  (879 genes)  IEA  
GO CC
GO MF
GO:0004252 [list] [network] serine-type endopeptidase activity  (144 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_006384343.1 [sequence] [blastp]
XP_024454348.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo_mito 4,  chlo 3,  nucl 1,  cyto 1,  plas 1,  cysk_nucl 1,  cyto_plas 1  (predict for XP_006384343.1)
cyto 7,  chlo 1,  nucl 1,  cysk 1,  chlo_mito 1,  cysk_nucl 1  (predict for XP_024454348.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_006384343.1)
other 8  (predict for XP_024454348.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7494582

.
ppo-r.4
for
7494582

.
ppo-m.4
for
7494582

.
gma-u.5
for
100804040

.
mtr-u.5
for
25495301

.
ath-u.5
for
DEG8

.
vvi-u.5
for
100249197

.
sly-u.5
for
101267480

.
osa-u.5
for
9268615

.
zma-u.5
for
100272554

.


Ortholog ID: 10973
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol DEG8 LOC100804040 LOC101267480 LOC9268615 LOC100272554 LOC103849895 LOC100249197 LOC7494582 LOC25495301 LOC123045662 LOC123189431 LOC123426909 LOC107892392 LOC107888602 LOC106347823 LOC106446029 CHLRE_01g028350v5 LOC8057473 LOC102604649 LOC102628747 LOC100821363 LOC107759360 LOC107821086
Function* Trypsin family protein with PDZ domain-containing protein protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic Protease Do-like 8 chloroplastic protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic uncharacterized protein protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic protease Do-like 8, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma01240 Biosynthesis of cofactors 4
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03013 Nucleocytoplasmic transport 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 4
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00440 Phosphonate and phosphinate metabolism 2
tae00564 Glycerophospholipid metabolism 2
tae00565 Ether lipid metabolism 2
tae02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae00440 Phosphonate and phosphinate metabolism 2
tae00565 Ether lipid metabolism 2
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03450 Non-homologous end-joining 2
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03450 Non-homologous end-joining 2
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna03060 Protein export 2
bna00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00220 Arginine biosynthesis 4
cre01230 Biosynthesis of amino acids 4
cre01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833979 100804040 101267480 9268615 100272554 103849895 100249197 7494582 25495301 123045662 123189431 123426909 107892392 107888602 106347823 106446029 5715325 8057473 102604649 102628747 100821363 107759360 107821086
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