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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7494789   trihelix transcription factor GT-1 
 ppo-r.4   7494789   trihelix transcription factor GT-1 
 ppo-u.5   7477045   trihelix transcription factor GT-1 
 gma-u.5   100809497   trihelix transcription factor GT-1 
 gma-u.5   100137074   GT-1 
 mtr-u.5   11440408   trihelix transcription factor GT-1 
 ath-u.5   GT-1   Homeodomain-like superfamily protein 
 vvi-u.5   100265024   trihelix transcription factor GT-1 
 vvi-u.5   100264546   trihelix transcription factor GT-1 
 vvi-u.5   100249383   trihelix transcription factor GT-1 
 sly-u.5   101263196   trihelix transcription factor GT-1-like 
 osa-u.5   4336214   trihelix transcription factor GT-4 
 zma-u.5   100280076   uncharacterized LOC100280076 

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Top 50 coexpressed genes to 7494789 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7494789 (ppo-u.5 coexpression data)

CoexMap"7494789"


ppoLOC7494789 | Entrez gene ID : 7494789    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 2 1 1 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_002312646.1 [sequence] [blastp]
XP_024463181.1 [sequence] [blastp]
XP_024463182.1 [sequence] [blastp]
XP_024463183.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  chlo 1,  extr 1,  pero 1,  cysk 1  (predict for XP_002312646.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024463181.1)
nucl 6,  cyto 1,  chlo 1,  extr 1,  pero 1,  cysk 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_024463182.1)
cyto 4,  nucl 2,  golg 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_024463183.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002312646.1)
other 8  (predict for XP_024463181.1)
other 8  (predict for XP_024463182.1)
other 8  (predict for XP_024463183.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7494789

.
ppo-r.4
for
7494789

.
ppo-u.5
for
7477045

.
gma-u.5
for
100809497

.
gma-u.5
for
100137074

.
mtr-u.5
for
11440408

.
ath-u.5
for
GT-1

.
vvi-u.5
for
100265024

.
vvi-u.5
for
100264546

.
vvi-u.5
for
100249383

.
sly-u.5
for
101263196

.
osa-u.5
for
4336214

.
zma-u.5
for
100280076

.


Ortholog ID: 4736
Species ath gma gma sly osa zma bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre cre sbi sot cit bdi nta nta
Symbol GT-1 LOC100809497 LOC100137074 LOC101263196 LOC4336214 LOC100280076 LOC103854392 LOC100249383 LOC100265024 LOC7477045 LOC7494789 LOC11440408 LOC123189575 LOC123053696 LOC123427056 LOC107946261 LOC107921941 LOC111203342 LOC106415412 CHLRE_03g151550v5 CHLRE_01g002950v5 LOC8060168 LOC102602413 LOC102613983 LOC100829253 LOC107760506 LOC107764092
Function* Homeodomain-like superfamily protein trihelix transcription factor GT-1 GT-1 trihelix transcription factor GT-1-like trihelix transcription factor GT-4 uncharacterized LOC100280076 trihelix transcription factor GT-4 trihelix transcription factor GT-1 trihelix transcription factor GT-1 trihelix transcription factor GT-1 trihelix transcription factor GT-1 trihelix transcription factor GT-1 trihelix transcription factor GT-1 trihelix transcription factor GT-4 trihelix transcription factor GT-1-like trihelix transcription factor GT-1 trihelix transcription factor GT-1 trihelix transcription factor GT-4-like trihelix transcription factor GT-1-like uncharacterized protein uncharacterized protein trihelix transcription factor GT-1 trihelix transcription factor GT-1 trihelix transcription factor GT-1-like trihelix transcription factor GT-1 trihelix transcription factor GT-4-like trihelix transcription factor GT-4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 4
sly03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00760 Nicotinate and nicotinamide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00760 Nicotinate and nicotinamide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 4
cre00260 Glycine, serine and threonine metabolism 3
cre01200 Carbon metabolism 3
cre01240 Biosynthesis of cofactors 3
cre00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 3
sbi03410 Base excision repair 3
sbi03420 Nucleotide excision repair 3
sbi03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837905 100809497 100137074 101263196 4336214 100280076 103854392 100249383 100265024 7477045 7494789 11440408 123189575 123053696 123427056 107946261 107921941 111203342 106415412 5721126 66051908 8060168 102602413 102613983 100829253 107760506 107764092
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