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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7495308   protease Do-like 5, chloroplastic 
 ppo-r.4   7495308   protease Do-like 5, chloroplastic 
 ppo-m.4   7495308   protease Do-like 5, chloroplastic 
 gma-u.5   100787248   protease Do-like 5, chloroplastic 
 mtr-u.5   11441854   protease Do-like 5, chloroplastic 
 ath-u.5   DEG5   DEGP protease 5 
 vvi-u.5   100260091   protease Do-like 5, chloroplastic 
 vvi-u.5   100243001   protease Do-like 5, chloroplastic 
 sly-u.5   101249390   protease Do-like 5, chloroplastic 
 osa-u.5   4352801   protease Do-like 5, chloroplastic 
 zma-u.5   100282647   protease Do-like 5 

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Top 50 coexpressed genes to 7495308 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7495308 (ppo-u.5 coexpression data)

CoexMap"7495308"


ppoLOC7495308 | Entrez gene ID : 7495308    
Species ppo gma mtr ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 3 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006508 [list] [network] proteolysis  (879 genes)  IEA  
GO CC
GO MF
GO:0004252 [list] [network] serine-type endopeptidase activity  (144 genes)  IEA  
Protein XP_002316715.2 [sequence] [blastp]
XP_024436740.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  cyto_plas 4,  mito 1,  E.R. 1  (predict for XP_002316715.2)
plas 7,  cyto_plas 4,  chlo 1,  mito 1,  E.R. 1,  chlo_mito 1  (predict for XP_024436740.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_002316715.2)
chlo 7  (predict for XP_024436740.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7495308

.
ppo-r.4
for
7495308

.
ppo-m.4
for
7495308

.
gma-u.5
for
100787248

.
mtr-u.5
for
11441854

.
ath-u.5
for
DEG5

.
vvi-u.5
for
100260091

.
vvi-u.5
for
100243001

.
sly-u.5
for
101249390

.
osa-u.5
for
4352801

.
zma-u.5
for
100282647

.


Ortholog ID: 9588
Species ath gma sly osa zma bra vvi vvi ppo mtr tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol DEG5 LOC100787248 LOC101249390 LOC4352801 LOC100282647 LOC103856280 LOC100243001 LOC100260091 LOC7495308 LOC11441854 LOC123102109 LOC123398088 LOC121208579 LOC107913801 LOC111212388 LOC106375670 LOC8071476 LOC102584197 LOC102616063 LOC100836402 LOC142169430 LOC107794043
Function* DEGP protease 5 protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5 protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic protease Do-like 5, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00053 Ascorbate and aldarate metabolism 2
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00260 Glycine, serine and threonine metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi01200 Carbon metabolism 4
ghi01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 5
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 6
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 5
nta00740 Riboflavin metabolism 3
nta00230 Purine metabolism 2
nta00730 Thiamine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 3
nta00230 Purine metabolism 2
nta00730 Thiamine metabolism 2
nta01232 Nucleotide metabolism 2
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827564 100787248 101249390 4352801 100282647 103856280 100243001 100260091 7495308 11441854 123102109 123398088 121208579 107913801 111212388 106375670 8071476 102584197 102616063 100836402 142169430 107794043
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