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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7495967   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 ppo-r.4   7495967   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 gma-u.5   100777064   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 gma-u.5   100777114   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 mtr-u.5   25495300   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 ath-u.5   AT5G39840   ATP-dependent RNA helicase 
 vvi-u.5   100853943   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 sly-u.5   101262978   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 osa-u.5   4336047   ATP-dependent RNA helicase SUV3L, mitochondrial-like 
 zma-u.5   100285160   ATP-dependent RNA helicase SUV3 

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Top 50 coexpressed genes to 7495967 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7495967 (ppo-u.5 coexpression data)

CoexMap"7495967"


ppoLOC7495967 | Entrez gene ID : 7495967    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 2 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000965 [list] [network] mitochondrial RNA 3'-end processing  (6 genes)  IEA  
GO:0006401 [list] [network] RNA catabolic process  (106 genes)  IEA  
GO CC
GO:0045025 [list] [network] mitochondrial degradosome  (2 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (68 genes)  IEA  
GO:0016817 [list] [network] hydrolase activity, acting on acid anhydrides  (914 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2559 genes)  IEA  
Protein XP_002324050.4 [sequence] [blastp]
XP_006373317.3 [sequence] [blastp]
XP_024444790.2 [sequence] [blastp]
XP_024444791.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 1  (predict for XP_002324050.4)
chlo 7,  chlo_mito 5,  mito 1  (predict for XP_006373317.3)
chlo 7,  chlo_mito 5,  mito 1  (predict for XP_024444790.2)
chlo 7,  chlo_mito 5,  mito 1  (predict for XP_024444791.2)
Subcellular
localization
TargetP
chlo 7,  mito 3  (predict for XP_002324050.4)
chlo 7,  mito 3  (predict for XP_006373317.3)
chlo 7,  mito 3  (predict for XP_024444790.2)
chlo 7,  mito 3  (predict for XP_024444791.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7495967

.
ppo-r.4
for
7495967

.
gma-u.5
for
100777064

.
gma-u.5
for
100777114

.
mtr-u.5
for
25495300

.
ath-u.5
for
AT5G39840

.
vvi-u.5
for
100853943

.
sly-u.5
for
101262978

.
osa-u.5
for
4336047

.
zma-u.5
for
100285160

.


Ortholog ID: 9706
Species ath gma gma sly osa bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G39840 LOC100777064 LOC100777114 LOC101262978 LOC4336047 LOC103849896 LOC100853943 LOC7495967 LOC25495300 LOC123045661 LOC123189427 LOC123426908 LOC107892394 LOC121206475 LOC106347824 LOC106446024 LOC110436085 LOC102594581 LOC102629021 LOC100821887 LOC107818603 LOC107808650
Function* ATP-dependent RNA helicase DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial-like DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial-like ATP-dependent RNA helicase SUV3L, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00670 One carbon pool by folate 2
nta03018 RNA degradation 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00670 One carbon pool by folate 2
nta03018 RNA degradation 2
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833980 100777064 100777114 101262978 4336047 103849896 100853943 7495967 25495300 123045661 123189427 123426908 107892394 121206475 106347824 106446024 110436085 102594581 102629021 100821887 107818603 107808650
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