ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-u.5	7496151	uncharacterized LOC7496151
ppo-r.4	7496151	uncharacterized LOC7496151
ppo-m.4	7496151	uncharacterized LOC7496151
gma-u.5	100810545	DNA-binding protein SMUBP-2
gma-u.5	100801854	DNA-binding protein SMUBP-2
mtr-u.5	11413327	DNA-binding protein SMUBP-2
ath-u.5	AT2G03270	DNA-binding protein
vvi-u.5	100262429	uncharacterized LOC100262429
sly-u.5	101249337	uncharacterized LOC101249337
osa-u.5	4333346	uncharacterized LOC4333346
zma-u.5	100280381	uncharacterized LOC100280381

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0043139 [list] [network] 5'-3' DNA helicase activity	(4 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(550 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1480 genes)	IEA
GO:0003677 [list] [network] DNA binding	(2205 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2559 genes)	IEA

Protein

XP_002308965.3 [sequence] [blastp]
XP_024459680.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, chlo 1, nucl 1, mito 1, plas 1, pero 1, cysk_nucl 1, mito_plas 1	(predict for XP_002308965.3)
cyto 6, chlo 2, nucl 1, cysk 1, cysk_nucl 1, E.R._vacu 1	(predict for XP_024459680.2)

Subcellular
localization
TargetP

other 6	(predict for XP_002308965.3)
other 8	(predict for XP_024459680.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7496151 .	ppo-r.4 for 7496151 .	ppo-m.4 for 7496151 .	gma-u.5 for 100810545 .	gma-u.5 for 100801854 .	mtr-u.5 for 11413327 .	ath-u.5 for AT2G03270 .	vvi-u.5 for 100262429 .	sly-u.5 for 101249337 .	osa-u.5 for 4333346 .	zma-u.5 for 100280381 .

Ortholog ID: 9972

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

Function^*

DNA-binding protein

DNA-binding protein SMUBP-2

uncharacterized LOC101249337

uncharacterized LOC4333346

uncharacterized LOC100280381

DNA-binding protein SMUBP-2

uncharacterized LOC100262429

uncharacterized LOC7496151

DNA-binding protein SMUBP-2

DNA-binding protein SMUBP-2-like

uncharacterized protein

DNA-binding protein SMUBP-2

uncharacterized LOC102627247

DNA-binding protein SMUBP-2

uncharacterized LOC107767374

uncharacterized LOC107792306

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	2
gma04517	IgSF CAM signaling	2
gma05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	3
mtr03022	Basal transcription factors	2
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00280	Valine, leucine and isoleucine degradation	2
ghi00410	beta-Alanine metabolism	2
ghi00640	Propanoate metabolism	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01200	Carbon metabolism	3
ghi00540	Lipopolysaccharide biosynthesis	2
ghi00220	Arginine biosynthesis	2
ghi01210	2-Oxocarboxylic acid metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	4
bna03022	Basal transcription factors	2
bna04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	2
bna00270	Cysteine and methionine metabolism	2
bna04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	3
cre01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00760	Nicotinate and nicotinamide metabolism	2
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	2
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00900	Terpenoid backbone biosynthesis	2
nta03040	Spliceosome	2
nta03008	Ribosome biogenesis in eukaryotes	2
nta03013	Nucleocytoplasmic transport	2
nta03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2
nta03008	Ribosome biogenesis in eukaryotes	2
nta03013	Nucleocytoplasmic transport	2
nta03250	Viral life cycle - HIV-1	2
nta03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

814856

100810545

100801854

101249337

4333346

100280381

103839413

100262429

7496151

11413327

123123222

123105424

123452732

107891290

107889542

106437947

106418340

5716031

8063003

102591799

102627247

100844439

107767374

107792306

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7496151 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7496151 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	vvi	sly	osa	zma	cre	ghi	cit	hvu	bdi	sot	bra	sbi	tae	nta	bna
Paralog	3	2	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7496151 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7496151 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**