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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7496486   protein CHUP1, chloroplastic 
 ppo-r.4   7496486   protein CHUP1, chloroplastic 
 ppo-m.4   7496486   protein CHUP1, chloroplastic 
 gma-u.5   100820135   protein CHUP1, chloroplastic 
 gma-u.5   100820086   uncharacterized LOC100820086 
 gma-u.5   100809254   protein CHUP1, chloroplastic 
 mtr-u.5   11421894   protein CHUP1, chloroplastic 
 ath-u.5   AT1G48280   hydroxyproline-rich glycoprotein family protein 
 vvi-u.5   100256278   protein CHUP1, chloroplastic 
 zma-u.5   100273374   Tetratricopeptide repeat (TPR)-like superfamily protein 

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Top 50 coexpressed genes to 7496486 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7496486 (ppo-u.5 coexpression data)

CoexMap"7496486"


ppoLOC7496486 | Entrez gene ID : 7496486    
Species ppo gma mtr ath vvi zma sly sbi nta bra osa cre cit hvu bdi sot tae bna ghi
Paralog 3 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009658 [list] [network] chloroplast organization  (99 genes)  IEA  
GO CC
GO:0009707 [list] [network] chloroplast outer membrane  (44 genes)  IEA  
GO MF
Protein XP_024467029.1 [sequence] [blastp]
XP_024467030.1 [sequence] [blastp]
XP_052312632.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  nucl 1  (predict for XP_024467029.1)
chlo 6,  mito 2,  nucl 1  (predict for XP_024467030.1)
chlo 6,  mito 2,  nucl 1  (predict for XP_052312632.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_024467029.1)
chlo 8  (predict for XP_024467030.1)
chlo 8  (predict for XP_052312632.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7496486

.
ppo-r.4
for
7496486

.
ppo-m.4
for
7496486

.
gma-u.5
for
100820135

.
gma-u.5
for
100820086

.
gma-u.5
for
100809254

.
mtr-u.5
for
11421894

.
ath-u.5
for
AT1G48280

.
vvi-u.5
for
100256278

.
zma-u.5
for
100273374

.


Ortholog ID: 12039
Species ath gma gma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi cit bdi
Symbol AT1G48280 LOC100809254 LOC100820086 LOC100273374 LOC103871479 LOC100256278 LOC7496486 LOC11421894 LOC123091722 LOC123096704 LOC123448125 LOC107910512 LOC107951552 LOC106353813 LOC106346417 LOC8155620 LOC102609433 LOC100841367
Function* hydroxyproline-rich glycoprotein family protein protein CHUP1, chloroplastic uncharacterized LOC100820086 Tetratricopeptide repeat (TPR)-like superfamily protein protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic-like protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic-like protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic protein CHUP1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 3
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00620 Pyruvate metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae00640 Propanoate metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841248 100809254 100820086 100273374 103871479 100256278 7496486 11421894 123091722 123096704 123448125 107910512 107951552 106353813 106346417 8155620 102609433 100841367
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