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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7496574   probable methyltransferase At1g27930 
 ppo-r.4   7496574   probable methyltransferase At1g27930 
 ppo-m.4   7496574   probable methyltransferase At1g27930 
 ppo-u.5   7460546   probable methyltransferase At1g27930 
 gma-u.5   100820087   probable methyltransferase At1g27930 
 gma-u.5   100789499   probable methyltransferase At1g27930 
 mtr-u.5   11441060   probable methyltransferase At1g27930 
 ath-u.5   AT1G27930   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 vvi-u.5   100265182   arabinogalactan O-methyltransferase 1 
 vvi-u.5   100253955   arabinogalactan O-methyltransferase 1 
 osa-u.5   4350540   arabinogalactan O-methyltransferase 1 
 zma-u.5   100284801   plant-specific domain TIGR01627 family protein 

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Top 50 coexpressed genes to 7496574 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7496574 (ppo-u.5 coexpression data)

CoexMap"7496574"


ppoLOC7496574 | Entrez gene ID : 7496574    
Species ppo gma mtr ath vvi osa zma sly sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045492 [list] [network] xylan biosynthetic process  (35 genes)  IEA  
GO CC
GO MF
Protein XP_002304685.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  extr 2,  vacu 2,  chlo_mito 2  (predict for XP_002304685.1)
Subcellular
localization
TargetP
scret 8  (predict for XP_002304685.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7496574

.
ppo-r.4
for
7496574

.
ppo-m.4
for
7496574

.
ppo-u.5
for
7460546

.
gma-u.5
for
100820087

.
gma-u.5
for
100789499

.
mtr-u.5
for
11441060

.
ath-u.5
for
AT1G27930

.
vvi-u.5
for
100265182

.
vvi-u.5
for
100253955

.
osa-u.5
for
4350540

.
zma-u.5
for
100284801

.


Ortholog ID: 2681
Species ath gma osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sot cit bdi nta
Symbol AT1G27930 LOC100820087 LOC4350540 LOC100284801 LOC103839009 LOC103829041 LOC100253955 LOC100265182 LOC7496574 LOC7460546 LOC25501752 LOC11441060 LOC123072513 LOC123080733 LOC123440952 LOC123430539 LOC107946266 LOC107917601 LOC106411270 LOC106358042 LOC8075801 LOC102593691 LOC102609885 LOC100846436 LOC107807561
Function* glucuronoxylan 4-O-methyltransferase-like protein (DUF579) probable methyltransferase At1g27930 arabinogalactan O-methyltransferase 1 plant-specific domain TIGR01627 family protein probable methyltransferase At1g27930 probable methyltransferase At1g27930 arabinogalactan O-methyltransferase 1 arabinogalactan O-methyltransferase 1 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 probable methyltransferase At1g27930 arabinogalactan O-methyltransferase 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra00510 N-Glycan biosynthesis 2
bra00513 Various types of N-glycan biosynthesis 2
bra03060 Protein export 2
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00670 One carbon pool by folate 3
vvi01200 Carbon metabolism 3
vvi00999 Biosynthesis of various plant secondary metabolites 3
vvi00260 Glycine, serine and threonine metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00670 One carbon pool by folate 6
mtr01230 Biosynthesis of amino acids 6
mtr01240 Biosynthesis of cofactors 6
mtr00270 Cysteine and methionine metabolism 6
mtr00541 Biosynthesis of various nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04145 Phagosome 3
tae04517 IgSF CAM signaling 3
tae04814 Motor proteins 3
tae00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04145 Phagosome 6
tae04517 IgSF CAM signaling 6
tae04814 Motor proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 5
sbi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 2
sot03450 Non-homologous end-joining 2
sot00240 Pyrimidine metabolism 2
sot01232 Nucleotide metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 8
nta04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839686 100820087 4350540 100284801 103839009 103829041 100253955 100265182 7496574 7460546 25501752 11441060 123072513 123080733 123440952 123430539 107946266 107917601 106411270 106358042 8075801 102593691 102609885 100846436 107807561
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