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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7496852   U-box domain-containing protein 44 
 ppo-r.4   7496852   U-box domain-containing protein 44 
 ppo-m.4   7496852   U-box domain-containing protein 44 
 ppo-u.5   7485648   U-box domain-containing protein 44 
 gma-u.5   100815928   U-box domain-containing protein 44 
 gma-u.5   100789746   U-box domain-containing protein 44 
 mtr-u.5   25490327   U-box domain-containing protein 44 
 ath-u.5   SAUL1   senescence-associated E3 ubiquitin ligase 1 
 ath-u.5   PUB43   ARM repeat superfamily protein 
 vvi-u.5   100252979   U-box domain-containing protein 43 
 sly-u.5   101262514   U-box domain-containing protein 44 
 osa-u.5   4333620   U-box domain-containing protein 44 
 osa-u.5   9269482   U-box domain-containing protein 44 
 zma-u.5   103650422   U-box domain-containing protein 43 
 zma-u.5   103640871   U-box domain-containing protein 43 
 zma-u.5   100502487   U-box domain-containing protein 44 

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Top 50 coexpressed genes to 7496852 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7496852 (ppo-u.5 coexpression data)

CoexMap"7496852"


ppoLOC7496852 | Entrez gene ID : 7496852    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 2 1 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (417 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (401 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002301911.2 [sequence] [blastp]
XP_024450486.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 1,  nucl 1,  vacu 1,  chlo_mito 1  (predict for XP_002301911.2)
cyto 7,  chlo 1,  nucl 1,  vacu 1,  chlo_mito 1  (predict for XP_024450486.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002301911.2)
other 9  (predict for XP_024450486.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7496852

.
ppo-r.4
for
7496852

.
ppo-m.4
for
7496852

.
ppo-u.5
for
7485648

.
gma-u.5
for
100815928

.
gma-u.5
for
100789746

.
mtr-u.5
for
25490327

.
ath-u.5
for
SAUL1

.
ath-u.5
for
PUB43

.
vvi-u.5
for
100252979

.
sly-u.5
for
101262514

.
osa-u.5
for
4333620

.
osa-u.5
for
9269482

.
zma-u.5
for
103650422

.
zma-u.5
for
103640871

.
zma-u.5
for
100502487

.


Ortholog ID: 5012
Species ath ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna sbi sbi sot cit bdi bdi nta
Symbol SAUL1 PUB43 LOC100815928 LOC100789746 LOC101262514 LOC4333620 LOC9269482 LOC103640871 LOC103650422 LOC103832097 LOC103835778 LOC100252979 LOC7496852 LOC7485648 LOC25490327 LOC123140149 LOC123102810 LOC123451995 LOC123403977 LOC107945240 LOC107922124 LOC106410599 LOC8061227 LOC8066457 LOC102601894 LOC102623719 LOC100835332 LOC100840365 LOC107801161
Function* senescence-associated E3 ubiquitin ligase 1 ARM repeat superfamily protein U-box domain-containing protein 44 U-box domain-containing protein 44 U-box domain-containing protein 44 U-box domain-containing protein 44 U-box domain-containing protein 44 U-box domain-containing protein 43 U-box domain-containing protein 43 U-box domain-containing protein 43 U-box domain-containing protein 44 U-box domain-containing protein 43 U-box domain-containing protein 44 U-box domain-containing protein 44 U-box domain-containing protein 44 U-box domain-containing protein 24 U-box domain-containing protein 44 U-box domain-containing protein 44-like U-box domain-containing protein 24-like U-box domain-containing protein 44 U-box domain-containing protein 44 U-box domain-containing protein 44 U-box domain-containing protein 44 U-box domain-containing protein 44 U-box domain-containing protein 44 U-box domain-containing protein 44 U-box domain-containing protein 44 U-box domain-containing protein 43 U-box domain-containing protein 44
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00030 Pentose phosphate pathway 2
ath00480 Glutathione metabolism 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00511 Other glycan degradation 2
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
vvi04626 Plant-pathogen interaction 2
vvi00541 Biosynthesis of various nucleotide sugars 2
vvi01250 Biosynthesis of nucleotide sugars 2
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04016 MAPK signaling pathway - plant 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 2
tae00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 3
sot03013 Nucleocytoplasmic transport 2
sot04016 MAPK signaling pathway - plant 2
sot04075 Plant hormone signal transduction 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00020 Citrate cycle (TCA cycle) 3
cit01200 Carbon metabolism 3
cit01210 2-Oxocarboxylic acid metabolism 3
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
bdi00250 Alanine, aspartate and glutamate metabolism 2
bdi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838668 843971 100815928 100789746 101262514 4333620 9269482 103640871 103650422 103832097 103835778 100252979 7496852 7485648 25490327 123140149 123102810 123451995 123403977 107945240 107922124 106410599 8061227 8066457 102601894 102623719 100835332 100840365 107801161
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