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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7494676   probable CoA ligase CCL5 
 gma-u.5   100811344   4-coumarate--CoA ligase-like 5 
 mtr-u.5   25482225   4-coumarate--CoA ligase-like 5 
 mtr-u.5   25482216   4-coumarate--CoA ligase-like 5 
 ath-u.5   4CL8   AMP-dependent synthetase and ligase family protein 
 ath-u.5   AT1G20490   AMP-dependent synthetase and ligase family protein 
 vvi-u.5   100265969   probable CoA ligase CCL5 
 vvi-u.5   100243654   probable CoA ligase CCL5 
 sly-u.5   101251665   probable CoA ligase CCL5 
 osa-u.5   4331515   4-coumarate--CoA ligase-like 4 
 zma-u.5   100274307   putative AMP-dependent synthetase and ligase superfamily protein 

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Top 50 coexpressed genes to 7494676 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7494676 (ppo-u.5 coexpression data)

CoexMap"7496879"


ppoLOC7496879 | Entrez gene ID : 7496879    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 1 1 2 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00592 [list] [network] alpha-Linolenic acid metabolism (75 genes)
GO BP
GO CC
GO:0005777 [list] [network] peroxisome  (105 genes)  IEA  
GO MF
GO:0016405 [list] [network] CoA-ligase activity  (34 genes)  IEA  
Protein XP_052306199.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 2,  nucl 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for XP_052306199.1)
Subcellular
localization
TargetP
chlo 6,  other 5  (predict for XP_052306199.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7494676

.
gma-u.5
for
100811344

.
mtr-u.5
for
25482225

.
mtr-u.5
for
25482216

.
ath-u.5
for
4CL8

.
ath-u.5
for
AT1G20490

.
vvi-u.5
for
100265969

.
vvi-u.5
for
100243654

.
sly-u.5
for
101251665

.
osa-u.5
for
4331515

.
zma-u.5
for
100274307

.


Ortholog ID: 6094
Species ath ath gma sly osa zma bra vvi vvi ppo mtr tae tae hvu ghi ghi bna sbi sot cit bdi nta nta
Symbol 4CL8 AT1G20490 LOC100811344 LOC101251665 LOC4331515 LOC100274307 LOC103835791 LOC100243654 LOC100265969 LOC7494676 LOC25482216 LOC123098882 LOC123105815 LOC123449771 LOC107910693 LOC107951336 LOC106440735 LOC8057422 LOC102581161 LOC102606631 LOC100829365 LOC107812179 LOC107788905
Function* AMP-dependent synthetase and ligase family protein AMP-dependent synthetase and ligase family protein 4-coumarate--CoA ligase-like 5 probable CoA ligase CCL5 4-coumarate--CoA ligase-like 4 putative AMP-dependent synthetase and ligase superfamily protein 4-coumarate--CoA ligase-like 5 probable CoA ligase CCL5 probable CoA ligase CCL5 probable CoA ligase CCL5 4-coumarate--CoA ligase-like 5 4-coumarate--CoA ligase-like 4 4-coumarate--CoA ligase-like 4 4-coumarate--CoA ligase-like 4 4-coumarate--CoA ligase-like 5 4-coumarate--CoA ligase-like 5 4-coumarate--CoA ligase-like 5 4-coumarate--CoA ligase-like 4 4-coumarate--CoA ligase-like 5 probable CoA ligase CCL5 4-coumarate--CoA ligase-like 4 putative CoA ligase CCL5 putative CoA ligase CCL5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00592 alpha-Linolenic acid metabolism 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00592 alpha-Linolenic acid metabolism 5
osa04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00260 Glycine, serine and threonine metabolism 3
zma00750 Vitamin B6 metabolism 3
zma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 7
bra00592 alpha-Linolenic acid metabolism 3
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00592 alpha-Linolenic acid metabolism 3
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 6
ppo00592 alpha-Linolenic acid metabolism 5
ppo00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00592 alpha-Linolenic acid metabolism 9
tae01230 Biosynthesis of amino acids 4
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00592 alpha-Linolenic acid metabolism 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 7
ghi04075 Plant hormone signal transduction 2
ghi04016 MAPK signaling pathway - plant 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00592 alpha-Linolenic acid metabolism 7
ghi04075 Plant hormone signal transduction 2
ghi04016 MAPK signaling pathway - plant 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 8
bna04626 Plant-pathogen interaction 4
bna00592 alpha-Linolenic acid metabolism 3
bna00601 Glycosphingolipid biosynthesis - lacto and neolacto series 2
bna00603 Glycosphingolipid biosynthesis - globo and isoglobo series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00592 alpha-Linolenic acid metabolism 5
sbi00480 Glutathione metabolism 2
sbi00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 4
sot00592 alpha-Linolenic acid metabolism 4
sot00520 Amino sugar and nucleotide sugar metabolism 3
sot01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 7
cit04146 Peroxisome 3
cit00071 Fatty acid degradation 2
cit01040 Biosynthesis of unsaturated fatty acids 2
cit01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 5
bdi04016 MAPK signaling pathway - plant 3
bdi00592 alpha-Linolenic acid metabolism 2
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 4
nta04141 Protein processing in endoplasmic reticulum 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 5
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833792 838637 100811344 101251665 4331515 100274307 103835791 100243654 100265969 7494676 25482216 123098882 123105815 123449771 107910693 107951336 106440735 8057422 102581161 102606631 100829365 107812179 107788905
The preparation time of this page was 4.3 [sec].