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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7496988   uncharacterized LOC7496988 
 ppo-r.4   7496988   uncharacterized LOC7496988 
 ppo-m.4   7496988   uncharacterized LOC7496988 
 ppo-u.5   7497215   uncharacterized LOC7497215 
 gma-u.5   100813760   guanine nucleotide exchange factor subunit RIC1 
 gma-u.5   100802342   guanine nucleotide exchange factor subunit RIC1 
 mtr-u.5   11439404   guanine nucleotide exchange factor subunit RIC1 
 ath-u.5   AT3G61480   Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor 
 ath-u.5   AT5G28350   Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor 
 ath-u.5   AT5G28442   quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor 
 vvi-u.5   100249848   uncharacterized LOC100249848 
 sly-u.5   101246379   uncharacterized LOC101246379 
 osa-u.5   9267267   uncharacterized LOC9267267 
 zma-u.5   103627831   guanine nucleotide exchange factor subunit Rich 
 zma-u.5   103654191   guanine nucleotide exchange factor subunit RIC1 

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Top 50 coexpressed genes to 7496988 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7496988 (ppo-u.5 coexpression data)

CoexMap"7496988"


ppoLOC7496988 | Entrez gene ID : 7496988    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 3 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042147 [list] [network] retrograde transport, endosome to Golgi  (26 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (350 genes)  IEA  
GO CC
GO:0034066 [list] [network] Ric1-Rgp1 guanyl-nucleotide exchange factor complex  (3 genes)  IEA  
GO:0000139 [list] [network] Golgi membrane  (110 genes)  IEA  
GO:0005829 [list] [network] cytosol  (1141 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024440917.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  E.R. 2,  cysk_nucl 2,  chlo 1,  plas 1,  cyto_E.R. 1  (predict for XP_024440917.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_024440917.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7496988

.
ppo-r.4
for
7496988

.
ppo-m.4
for
7496988

.
ppo-u.5
for
7497215

.
gma-u.5
for
100813760

.
gma-u.5
for
100802342

.
mtr-u.5
for
11439404

.
ath-u.5
for
AT3G61480

.
ath-u.5
for
AT5G28350

.
ath-u.5
for
AT5G28442

.
vvi-u.5
for
100249848

.
sly-u.5
for
101246379

.
osa-u.5
for
9267267

.
zma-u.5
for
103627831

.
zma-u.5
for
103654191

.


Ortholog ID: 7634
Species ath ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit cit bdi nta nta
Symbol AT5G28442 AT5G28350 LOC100802342 LOC100813760 LOC101246379 LOC9267267 LOC103654191 LOC103627831 LOC103841970 LOC100249848 LOC7496988 LOC7497215 LOC11439404 LOC123145811 LOC123128679 LOC123406380 LOC107955275 LOC107954533 LOC106415405 LOC106415437 CHLRE_12g506650v5 LOC8082702 LOC102578698 LOC102614502 LOC127898615 LOC100824603 LOC107801917 LOC107786678
Function* quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor guanine nucleotide exchange factor subunit RIC1 guanine nucleotide exchange factor subunit RIC1 uncharacterized LOC101246379 uncharacterized LOC9267267 guanine nucleotide exchange factor subunit RIC1 guanine nucleotide exchange factor subunit Rich RAB6A-GEF complex partner protein 1 uncharacterized LOC100249848 uncharacterized LOC7496988 uncharacterized LOC7497215 guanine nucleotide exchange factor subunit RIC1 guanine nucleotide exchange factor subunit Rich guanine nucleotide exchange factor subunit RIC1 guanine nucleotide exchange factor subunit Rich-like guanine nucleotide exchange factor subunit RIC1 guanine nucleotide exchange factor subunit RIC1 guanine nucleotide exchange factor subunit RIC1 guanine nucleotide exchange factor subunit RIC1-like uncharacterized protein guanine nucleotide exchange factor subunit Rich RAB6A-GEF complex partner protein 1-like uncharacterized LOC102614502 uncharacterized LOC127898615 guanine nucleotide exchange factor subunit Rich uncharacterized LOC107801917 uncharacterized LOC107786678
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 3
osa00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 3
vvi04144 Endocytosis 3
vvi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04136 Autophagy - other 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 4
mtr04142 Lysosome 3
mtr05100 Bacterial invasion of epithelial cells 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04148 Efferocytosis 3
tae05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 5
tae04144 Endocytosis 4
tae05100 Bacterial invasion of epithelial cells 4
tae00500 Starch and sucrose metabolism 3
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 3
hvu04144 Endocytosis 3
hvu05100 Bacterial invasion of epithelial cells 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 6
ghi04144 Endocytosis 5
ghi05100 Bacterial invasion of epithelial cells 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 6
ghi04144 Endocytosis 5
ghi05100 Bacterial invasion of epithelial cells 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 8
bna04144 Endocytosis 8
bna05100 Bacterial invasion of epithelial cells 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 8
bna04144 Endocytosis 8
bna05100 Bacterial invasion of epithelial cells 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 3
bdi04144 Endocytosis 3
bdi05100 Bacterial invasion of epithelial cells 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 10723119 832920 100802342 100813760 101246379 9267267 103654191 103627831 103841970 100249848 7496988 7497215 11439404 123145811 123128679 123406380 107955275 107954533 106415405 106415437 66055510 8082702 102578698 102614502 127898615 100824603 107801917 107786678
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