ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-u.5	7497274	extensin
ppo-r.4	7497274	extensin
ppo-u.5	7492797	vegetative cell wall protein gp1
gma-u.5	102670397	putative uncharacterized protein DDB_G0290521
gma-u.5	102664793	arp2/3 complex-activating protein rickA
mtr-u.5	11442219	putative uncharacterized protein DDB_G0290521
mtr-u.5	11440896	uncharacterized LOC11440896
ath-u.5	AT2G46630	serine/arginine repetitive matrix protein
bra-r.6	103866448	serine/arginine repetitive matrix protein 1
bra-r.6	103866290	proline-rich receptor-like protein kinase PERK9
ghi-r.1	107952979	flocculation protein FLO11
ghi-r.1	107956104	protein piccolo
ghi-r.1	107924692	proteoglycan 4
bna-r.1	106453237	proline-rich receptor-like protein kinase PERK9
bna-r.1	106450488	serine/arginine repetitive matrix protein 1-like
bna-r.1	106420763	pollen-specific leucine-rich repeat extensin-like protein 1
cit-r.1	102612834	vegetative cell wall protein gp1
cit-r.1	127900848	vegetative cell wall protein gp1-like
sot-r.1	102599437	vegetative cell wall protein gp1-like

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_052306147.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 6, chlo 4

(predict for XP_052306147.1)

Subcellular
localization
TargetP

chlo 5, mito 3

(predict for XP_052306147.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-u.5 for 7497274	ppo-r.4 for 7497274	ppo-u.5 for 7492797	gma-u.5 for 102670397	gma-u.5 for 102664793	mtr-u.5 for 11442219	mtr-u.5 for 11440896	ath-u.5 for AT2G46630	bra-r.6 for 103866448	bra-r.6 for 103866290	ghi-r.1 for 107952979	ghi-r.1 for 107956104	ghi-r.1 for 107924692	bna-r.1 for 106453237	bna-r.1 for 106450488	bna-r.1 for 106420763	cit-r.1 for 102612834	cit-r.1 for 127900848	sot-r.1 for 102599437

Ortholog

Ortholog ID: 6446

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sot

Symbol

Function^*

extensin

vegetative cell wall protein gp1

putative uncharacterized protein DDB_G0290521

uncharacterized LOC11440896

serine/arginine repetitive matrix protein

serine/arginine repetitive matrix protein 1

proline-rich receptor-like protein kinase PERK9

vegetative cell wall protein gp1

flocculation protein FLO11

protein piccolo

proteoglycan 4

pollen-specific leucine-rich repeat extensin-like protein 1

vegetative cell wall protein gp1

vegetative cell wall protein gp1-like

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03083	Polycomb repressive complex	2
bra04120	Ubiquitin mediated proteolysis	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00564	Glycerophospholipid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

7497274

7492797

102670397

11442219

11440896

3768746

103866448

103866290

104881879

107952979

107956104

107923568

106420763

102612834

127900848

102599437

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7497274 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7497274 (ppo-u.5 coexpression data)


Species	ppo	gma	mtr	ath	bra	ghi	bna	cit	sot	cre	vvi	nta	hvu	tae	bdi	osa	zma	sly	sbi
Paralog	3	2	2	1	2	3	3	2	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7497274 (ppo-u.5 coexpression data)

Top 50 enrichment test to 7497274 (ppo-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**