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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7497872   trehalase 
 ppo-r.4   7497872   trehalase 
 ppo-u.5   7467057   trehalase 
 gma-u.5   TRE1   trehalase 1 
 mtr-u.5   25502241   trehalase 
 ath-u.5   TRE1   trehalase 1 
 vvi-u.5   100246241   trehalase 
 sly-u.5   101244979   probable trehalase 
 osa-u.5   4349141   probable trehalase 
 zma-u.5   100280412   trehalase1 

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Top 50 coexpressed genes to 7497872 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7497872 (ppo-u.5 coexpression data)

CoexMap"7497872"


ppoLOC7497872 | Entrez gene ID : 7497872    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop00500 [list] [network] Starch and sucrose metabolism (188 genes)
GO BP
GO:0005993 [list] [network] trehalose catabolic process  (4 genes)  IEA  
GO CC
GO MF
GO:0004555 [list] [network] alpha,alpha-trehalase activity  (4 genes)  IEA  
Protein XP_002303674.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  plas 1,  extr 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for XP_002303674.2)
Subcellular
localization
TargetP
other 5,  scret 3  (predict for XP_002303674.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7497872

.
ppo-r.4
for
7497872

.
ppo-u.5
for
7467057

.
gma-u.5
for
TRE1

.
mtr-u.5
for
25502241

.
ath-u.5
for
TRE1

.
vvi-u.5
for
100246241

.
sly-u.5
for
101244979

.
osa-u.5
for
4349141

.
zma-u.5
for
100280412

.


Ortholog ID: 6051
Species ath gma sly osa zma bra bra vvi mtr tae tae hvu ghi ghi bna bna cre sbi sot cit cit bdi nta nta
Symbol TRE1 TRE1 LOC101244979 LOC4349141 LOC100280412 LOC103861669 LOC103861458 LOC100246241 LOC25502241 LOC123049002 LOC123168174 LOC123434884 LOC107904513 LOC107922859 LOC106414110 LOC106376007 CHLRE_03g195600v5 LOC8062898 LOC102579182 LOC102614800 LOC102617704 LOC100843476 LOC107790848 LOC107800134
Function* trehalase 1 trehalase 1 probable trehalase probable trehalase trehalase1 trehalase trehalase-like trehalase trehalase probable trehalase probable trehalase probable trehalase trehalase trehalase trehalase-like trehalase uncharacterized protein probable trehalase probable trehalase probable trehalase probable trehalase probable trehalase putative trehalase putative trehalase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 3
gma00513 Various types of N-glycan biosynthesis 3
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 4
sly00010 Glycolysis / Gluconeogenesis 3
sly00500 Starch and sucrose metabolism 3
sly01230 Biosynthesis of amino acids 3
sly00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
osa00052 Galactose metabolism 2
osa04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 9
zma04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
bra00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
vvi01230 Biosynthesis of amino acids 5
vvi04141 Protein processing in endoplasmic reticulum 3
vvi03060 Protein export 2
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00350 Tyrosine metabolism 3
mtr01230 Biosynthesis of amino acids 3
mtr00360 Phenylalanine metabolism 2
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
mtr00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 5
tae04146 Peroxisome 4
tae00071 Fatty acid degradation 3
tae00280 Valine, leucine and isoleucine degradation 3
tae00410 beta-Alanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 5
tae00410 beta-Alanine metabolism 5
tae04146 Peroxisome 5
tae00071 Fatty acid degradation 4
tae01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 16
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
sbi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 3
cit00620 Pyruvate metabolism 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 3
cit00620 Pyruvate metabolism 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 5
bdi01200 Carbon metabolism 3
bdi00330 Arginine and proline metabolism 2
bdi00195 Photosynthesis 2
bdi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828504 547539 101244979 4349141 100280412 103861669 103861458 100246241 25502241 123049002 123168174 123434884 107904513 107922859 106414110 106376007 5718746 8062898 102579182 102614800 102617704 100843476 107790848 107800134
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