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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7498226   uncharacterized LOC7498226 
 ppo-r.4   7498226   uncharacterized LOC7498226 
 gma-u.5   100500240   uncharacterized LOC100500240 
 mtr-u.5   25486615   uncharacterized LOC25486615 
 ath-u.5   AT1G48170   proteasome assembly chaperone 
 vvi-u.5   100853705   uncharacterized LOC100853705 
 vvi-u.5   100244351   uncharacterized LOC100244351 
 sly-u.5   101246538   PAC4 domain-containing protein 
 osa-u.5   4351683   uncharacterized LOC4351683 
 zma-u.5   100278713   uncharacterized LOC100278713 
 zma-u.5   100217088   uncharacterized LOC100217088 

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Top 50 coexpressed genes to 7498226 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7498226 (ppo-u.5 coexpression data)

CoexMap"7498226"


ppoLOC7498226 | Entrez gene ID : 7498226    
Species ppo gma mtr ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 2 1 1 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043248 [list] [network] proteasome assembly  (12 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024462157.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1  (predict for XP_024462157.2)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_024462157.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7498226

.
ppo-r.4
for
7498226

.
gma-u.5
for
100500240

.
mtr-u.5
for
25486615

.
ath-u.5
for
AT1G48170

.
vvi-u.5
for
100853705

.
vvi-u.5
for
100244351

.
sly-u.5
for
101246538

.
osa-u.5
for
4351683

.
zma-u.5
for
100278713

.
zma-u.5
for
100217088

.


Ortholog ID: 9251
Species ath gma sly osa zma zma bra vvi vvi ppo mtr tae hvu ghi ghi bna bna cre sbi sbi sot bdi nta nta
Symbol AT1G48170 LOC100500240 LOC101246538 LOC4351683 LOC100217088 LOC100278713 LOC103871490 LOC100244351 LOC100853705 LOC7498226 LOC25486615 LOC123104575 LOC123397528 LOC107931489 LOC107935105 LOC106404615 LOC106346405 CHLRE_04g216300v5 LOC8054113 LOC8054960 LOC102599927 LOC100845545 LOC107773607 LOC107774634
Function* proteasome assembly chaperone uncharacterized LOC100500240 PAC4 domain-containing protein uncharacterized LOC4351683 uncharacterized LOC100217088 uncharacterized LOC100278713 proteasome assembly chaperone 4 uncharacterized LOC100244351 uncharacterized LOC100853705 uncharacterized LOC7498226 uncharacterized LOC25486615 proteasome assembly chaperone 4 proteasome assembly chaperone 4 proteasome assembly chaperone 4 uncharacterized LOC107935105 proteasome assembly chaperone 4 proteasome assembly chaperone 4-like uncharacterized protein proteasome assembly chaperone 4 proteasome assembly chaperone 4 uncharacterized LOC102599927 proteasome assembly chaperone 4 uncharacterized LOC107773607 uncharacterized LOC107774634
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 2
ath04144 Endocytosis 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03008 Ribosome biogenesis in eukaryotes 5
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03022 Basal transcription factors 3
sly03010 Ribosome 2
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03420 Nucleotide excision repair 4
osa03040 Spliceosome 4
osa03030 DNA replication 3
osa03410 Base excision repair 3
osa03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma03040 Spliceosome 3
zma03018 RNA degradation 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu01240 Biosynthesis of cofactors 2
hvu03018 RNA degradation 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi03040 Spliceosome 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi03040 Spliceosome 4
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna03040 Spliceosome 4
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi03015 mRNA surveillance pathway 3
sbi03013 Nucleocytoplasmic transport 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03022 Basal transcription factors 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841236 100500240 101246538 4351683 100217088 100278713 103871490 100244351 100853705 7498226 25486615 123104575 123397528 107931489 107935105 106404615 106346405 5724251 8054113 8054960 102599927 100845545 107773607 107774634
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