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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   778113   cyclic dof factor 3 
 gma-r.7   778113   cyclic dof factor 3 
 gma-m.5   778113   cyclic dof factor 3 
 gma-u.5   778120   C2C2-Zn Dof transcription factor 
 gma-u.5   100813787   zf-Dof domain-containing protein 
 gma-u.5   100813315   cyclic dof factor 2 
 mtr-u.5   25490407   cyclic dof factor 1 
 mtr-u.5   11445690   cyclic dof factor 1 
 mtr-u.5   11435622   cyclic dof factor 1 
 ppo-u.5   7489704   cyclic dof factor 3 
 ppo-u.5   7495982   cyclic dof factor 2 
 ppo-u.5   7464583   cyclic dof factor 3 
 ath-u.5   CDF3   cycling DOF factor 3 
 ath-u.5   CDF2   cycling DOF factor 2 
 ath-u.5   CDF1   cycling DOF factor 1 
 vvi-u.5   100265355   cyclic dof factor 2 
 vvi-u.5   100257057   cyclic dof factor 3 
 vvi-u.5   100254372   cyclic dof factor 2 
 sly-u.5   101243956   cyclic dof factor 1 
 sly-u.5   101262001   cyclic dof factor 1 
 sly-u.5   Dof22   Dof zinc finger protein 22 
 osa-u.5   4324267   cyclic dof factor 1 
 osa-u.5   9272566   cyclic dof factor 2 
 osa-u.5   4344326   cyclic dof factor 2 
 zma-u.5   100276261   uncharacterized LOC100276261 
 zma-u.5   103650023   cyclic dof factor 2 
 zma-u.5   100193013   uncharacterized LOC100193013 

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Top 50 coexpressed genes to 778113 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 778113 (gma-u.5 coexpression data)

CoexMap"778113"


gmaLOC778113 | Entrez gene ID : 778113      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (3122 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (2313 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
Protein NP_001304489.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  mito 1  (predict for NP_001304489.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001304489.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
778113

.
gma-r.7
for
778113

.
gma-m.5
for
778113

.
gma-u.5
for
778120

.
gma-u.5
for
100813787

.
gma-u.5
for
100813315

.
mtr-u.5
for
25490407

.
mtr-u.5
for
11445690

.
mtr-u.5
for
11435622

.
ppo-u.5
for
7489704

.
ppo-u.5
for
7495982

.
ppo-u.5
for
7464583

.
ath-u.5
for
CDF3

.
ath-u.5
for
CDF2

.
ath-u.5
for
CDF1

.
vvi-u.5
for
100265355

.
vvi-u.5
for
100257057

.
vvi-u.5
for
100254372

.
sly-u.5
for
101243956

.
sly-u.5
for
101262001

.
sly-u.5
for
Dof22

.
osa-u.5
for
4324267

.
osa-u.5
for
9272566

.
osa-u.5
for
4344326

.
zma-u.5
for
100276261

.
zma-u.5
for
103650023

.
zma-u.5
for
100193013

.


Ortholog ID: 658
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol CDF1 CDF3 LOC100813315 LOC100788246 LOC101248009 LOC101243956 LOC4344326 LOC4324267 LOC100275712 LOC100276261 LOC103863905 LOC103874677 LOC100257057 LOC100241530 LOC7495982 LOC11435622 LOC11410541 LOC123051520 LOC123061029 LOC123443531 LOC123424683 LOC107890451 LOC107924499 LOC106435356 LOC106352672 LOC8085828 LOC8054666 LOC102603307 LOC102600000 LOC102629672 LOC102615735 LOC100825862 LOC100824853 LOC107804993 LOC107802463
Function* cycling DOF factor 1 cycling DOF factor 3 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 2 uncharacterized LOC100276261 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 3 cyclic dof factor 3 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 2 cyclic dof factor 3-like cyclic dof factor 1-like cyclic dof factor 1 cyclic dof factor 3 cyclic dof factor 3 cyclic dof factor 2 cyclic dof factor 2 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 3-like cyclic dof factor 3 cyclic dof factor 2 cyclic dof factor 1 cyclic dof factor 1 cyclic dof factor 1-like cyclic dof factor 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 3
mtr00330 Arginine and proline metabolism 3
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 2
hvu00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00561 Glycerolipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836364 823904 100813315 100788246 101248009 101243956 4344326 4324267 100275712 100276261 103863905 103874677 100257057 100241530 7495982 11435622 11410541 123051520 123061029 123443531 123424683 107890451 107924499 106435356 106352672 8085828 8054666 102603307 102600000 102629672 102615735 100825862 100824853 107804993 107802463
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