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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   APX2   cytosolic ascorbate peroxidase 2 
 sly-r.6   APX2   cytosolic ascorbate peroxidase 2 
 sly-m.5   APX2   cytosolic ascorbate peroxidase 2 
 sly-u.5   APX1   cytosolic ascorbate peroxidase 1 
 sly-u.5   101258987   L-ascorbate peroxidase 2, cytosolic 
 sly-u.5   101264583   L-ascorbate peroxidase 5 
 ath-u.5   APX5   ascorbate peroxidase 5 
 ath-u.5   APX1   ascorbate peroxidase 1 
 ath-u.5   APX3   ascorbate peroxidase 3 
 gma-u.5   APX2   L-ascorbate peroxidase 2 
 gma-u.5   100170727   peroxisomal ascorbate peroxidase 
 gma-u.5   APX1   ascorbate peroxidase 1, cytosolic 
 vvi-u.5   100233013   L-ascorbate peroxidase 2, cytosolic 
 vvi-u.5   100246866   L-ascorbate peroxidase 3 
 vvi-u.5   APX   cytosolic ascorbate peroxidase 
 ppo-u.5   7494249   L-ascorbate peroxidase 3 
 ppo-u.5   7467602   L-ascorbate peroxidase, cytosolic 
 ppo-u.5   7491126   L-ascorbate peroxidase, cytosolic 
 mtr-u.5   11419719   L-ascorbate peroxidase 3 
 mtr-u.5   11412115   L-ascorbate peroxidase, cytosolic 
 mtr-u.5   11443228   L-ascorbate peroxidase 3 
 osa-u.5   4335202   probable L-ascorbate peroxidase 3, peroxisomal 
 osa-u.5   9269342   probable L-ascorbate peroxidase 4, peroxisomal 
 osa-u.5   4344397   L-ascorbate peroxidase 2, cytosolic-like 
 zma-u.5   100283822   APx1 - Cytosolic Ascorbate Peroxidase 
 zma-u.5   100282326   APx3 - Peroxisomal Ascorbate Peroxidase 
 zma-u.5   100285887   APx1 - Cytosolic Ascorbate Peroxidase 

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Top 50 coexpressed genes to APX2 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to APX2 (sly-u.5 coexpression data)

CoexMap"778224"


slyAPX2 | Entrez gene ID : 778224      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 6 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00053 [list] [network] Ascorbate and aldarate metabolism (66 genes)
sly00480 [list] [network] Glutathione metabolism (112 genes)
GO BP
GO:0034599 [list] [network] cellular response to oxidative stress  (33 genes)  IEA  
GO:0000302 [list] [network] response to reactive oxygen species  (39 genes)  IEA  
GO:0042744 [list] [network] hydrogen peroxide catabolic process  (133 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (632 genes)  IEA  
GO MF
GO:0004601 [list] [network] peroxidase activity  (153 genes)  IEA  
GO:0020037 [list] [network] heme binding  (451 genes)  IEA  
Protein NP_001234788.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  cyto 4  (predict for NP_001234788.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001234788.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
APX2

.
sly-r.6
for
APX2

.
sly-m.5
for
APX2

.
sly-u.5
for
APX1

.
sly-u.5
for
101258987

.
sly-u.5
for
101264583

.
ath-u.5
for
APX5

.
ath-u.5
for
APX1

.
ath-u.5
for
APX3

.
gma-u.5
for
APX2

.
gma-u.5
for
100170727

.
gma-u.5
for
APX1

.
vvi-u.5
for
100233013

.
vvi-u.5
for
100246866

.
vvi-u.5
for
APX

.
ppo-u.5
for
7494249

.
ppo-u.5
for
7467602

.
ppo-u.5
for
7491126

.
mtr-u.5
for
11419719

.
mtr-u.5
for
11412115

.
mtr-u.5
for
11443228

.
osa-u.5
for
4335202

.
osa-u.5
for
9269342

.
osa-u.5
for
4344397

.
zma-u.5
for
100283822

.
zma-u.5
for
100282326

.
zma-u.5
for
100285887

.


Ortholog ID: 594
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol APX5 APX2 APX2 APX1 LOC101264261 LOC101264583 LOC4344397 LOC9269342 LOC542476 LOC103647558 LOC103871533 LOC103843426 LOC100233013 LOC18100237 LOC7491126 LOC11443228 LOC11419719 LOC123092501 LOC123048498 LOC123407919 LOC123424584 LOC107959060 LOC106415142 CHLRE_09g401886v5 LOC8081447 LOC8067730 LOC102578720 LOC102586145 LOC102607382 LOC102630188 LOC100838967 LOC100839539 LOC107774730 LOC107819788
Function* ascorbate peroxidase 5 ascorbate peroxidase 2 L-ascorbate peroxidase 2 ascorbate peroxidase 1, cytosolic L-ascorbate peroxidase 3, peroxisomal L-ascorbate peroxidase 5 L-ascorbate peroxidase 2, cytosolic-like probable L-ascorbate peroxidase 4, peroxisomal ascorbate peroxidase 2 L-ascorbate peroxidase 1, cytosolic L-ascorbate peroxidase 1, cytosolic L-ascorbate peroxidase 1, cytosolic L-ascorbate peroxidase 2, cytosolic L-ascorbate peroxidase 2, cytosolic L-ascorbate peroxidase, cytosolic L-ascorbate peroxidase 3 L-ascorbate peroxidase 3 L-ascorbate peroxidase 1, cytosolic probable L-ascorbate peroxidase 3, peroxisomal probable L-ascorbate peroxidase 4, peroxisomal L-ascorbate peroxidase 2, cytosolic L-ascorbate peroxidase, cytosolic-like L-ascorbate peroxidase 1, cytosolic-like uncharacterized protein L-ascorbate peroxidase 1, cytosolic probable L-ascorbate peroxidase 3 L-ascorbate peroxidase, cytosolic L-ascorbate peroxidase 1, cytosolic L-ascorbate peroxidase 3 L-ascorbate peroxidase 3 L-ascorbate peroxidase 2, cytosolic probable L-ascorbate peroxidase 4, peroxisomal L-ascorbate peroxidase 2, cytosolic L-ascorbate peroxidase 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma00020 Citrate cycle (TCA cycle) 5
gma01200 Carbon metabolism 5
gma00053 Ascorbate and aldarate metabolism 4
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 6
gma00860 Porphyrin metabolism 5
gma00020 Citrate cycle (TCA cycle) 4
gma01200 Carbon metabolism 4
gma00053 Ascorbate and aldarate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00053 Ascorbate and aldarate metabolism 2
sly00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 5
osa04626 Plant-pathogen interaction 2
osa03040 Spliceosome 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00071 Fatty acid degradation 5
osa01200 Carbon metabolism 4
osa00592 alpha-Linolenic acid metabolism 4
osa01212 Fatty acid metabolism 4
osa00280 Valine, leucine and isoleucine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma00480 Glutathione metabolism 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00053 Ascorbate and aldarate metabolism 4
zma00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
bra03013 Nucleocytoplasmic transport 6
bra00270 Cysteine and methionine metabolism 4
bra01230 Biosynthesis of amino acids 3
bra00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
bra03013 Nucleocytoplasmic transport 4
bra00053 Ascorbate and aldarate metabolism 2
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi00190 Oxidative phosphorylation 2
vvi00053 Ascorbate and aldarate metabolism 2
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00480 Glutathione metabolism 6
ppo00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00480 Glutathione metabolism 7
ppo04141 Protein processing in endoplasmic reticulum 5
ppo00053 Ascorbate and aldarate metabolism 3
ppo04626 Plant-pathogen interaction 3
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 8
tae01230 Biosynthesis of amino acids 8
tae00010 Glycolysis / Gluconeogenesis 7
tae00051 Fructose and mannose metabolism 4
tae00220 Arginine biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00480 Glutathione metabolism 4
tae00500 Starch and sucrose metabolism 4
tae00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00630 Glyoxylate and dicarboxylate metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 3
hvu03013 Nucleocytoplasmic transport 2
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 10
ghi01230 Biosynthesis of amino acids 10
ghi00480 Glutathione metabolism 9
ghi00010 Glycolysis / Gluconeogenesis 9
ghi00053 Ascorbate and aldarate metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00053 Ascorbate and aldarate metabolism 6
bna00480 Glutathione metabolism 6
bna03060 Protein export 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 5
sbi00480 Glutathione metabolism 4
sbi00010 Glycolysis / Gluconeogenesis 4
sbi00710 Carbon fixation by Calvin cycle 4
sbi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 13
sot03040 Spliceosome 3
sot04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 5
sot03013 Nucleocytoplasmic transport 5
sot00480 Glutathione metabolism 3
sot03008 Ribosome biogenesis in eukaryotes 3
sot03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 2
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 2
nta00480 Glutathione metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 6
nta01200 Carbon metabolism 5
nta00053 Ascorbate and aldarate metabolism 4
nta00071 Fatty acid degradation 4
nta00410 beta-Alanine metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829751 820121 606508 553156 101264261 101264583 4344397 9269342 542476 103647558 103871533 103843426 100233013 18100237 7491126 11443228 11419719 123092501 123048498 123407919 123424584 107959060 106415142 5723171 8081447 8067730 102578720 102586145 102607382 102630188 100838967 100839539 107774730 107819788
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