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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   RAN2A   GTP-binding nuclear protein Ran2A 
 sly-r.6   RAN2A   GTP-binding nuclear protein Ran2A 
 sly-u.5   RAN2B   Ran protein/TC4 protein 
 sly-u.5   RAN1   Ran protein/TC4 protein 
 ath-u.5   RAN-1   RAS-related nuclear protein-1 
 ath-u.5   RAN2   RAS-related GTP-binding nuclear protein 2 
 ath-u.5   RAN3   RAN GTPase 3 
 gma-u.5   100813605   GTP-binding nuclear protein Ran-3 
 gma-u.5   100813067   GTP-binding nuclear protein Ran-3 
 gma-u.5   100775298   GTP-binding nuclear protein Ran-1-like 
 vvi-u.5   100250818   GTP-binding nuclear protein Ran-3 
 vvi-u.5   100266996   GTP-binding nuclear protein Ran-3 
 ppo-u.5   7495760   GTP-binding nuclear protein Ran-3 
 ppo-u.5   7462975   GTP-binding nuclear protein Ran-3 
 ppo-u.5   7459012   GTP-binding nuclear protein Ran-3 
 mtr-u.5   25490032   GTP-binding nuclear protein Ran/TC4 
 mtr-u.5   25490031   GTP-binding nuclear protein Ran/TC4 
 mtr-u.5   11441617   GTP-binding nuclear protein Ran-2 
 osa-u.5   9266942   GTP-binding nuclear protein Ran-3 
 osa-u.5   4339683   GTP-binding nuclear protein Ran-2-like 
 osa-u.5   4325312   GTP-binding nuclear protein Ran-1-like 
 zma-u.5   100382806   uncharacterized LOC100382806 
 zma-u.5   100282843   uncharacterized LOC100282843 
 zma-u.5   100193260   GTP-binding nuclear protein Ran-A1 

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Top 50 coexpressed genes to RAN2A (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RAN2A (sly-u.5 coexpression data)

CoexMap"778290"


slyRAN2A | Entrez gene ID : 778290    
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 3 2 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03008 [list] [network] Ribosome biogenesis in eukaryotes (5923 genes)
sly03013 [list] [network] Nucleocytoplasmic transport (106 genes)
sly03250 [list] [network] Viral life cycle - HIV-1 (38 genes)
GO BP
GO:0000054 [list] [network] ribosomal subunit export from nucleus  (17 genes)  IEA  
GO:0006606 [list] [network] protein import into nucleus  (46 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (208 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (239 genes)  IEA  
Protein NP_001234020.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  nucl 2,  mito 1,  extr 1,  cysk 1  (predict for NP_001234020.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001234020.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
RAN2A

.
sly-r.6
for
RAN2A

.
sly-u.5
for
RAN2B

.
sly-u.5
for
RAN1

.
ath-u.5
for
RAN-1

.
ath-u.5
for
RAN2

.
ath-u.5
for
RAN3

.
gma-u.5
for
100813605

.
gma-u.5
for
100813067

.
gma-u.5
for
100775298

.
vvi-u.5
for
100250818

.
vvi-u.5
for
100266996

.
ppo-u.5
for
7495760

.
ppo-u.5
for
7462975

.
ppo-u.5
for
7459012

.
mtr-u.5
for
25490032

.
mtr-u.5
for
25490031

.
mtr-u.5
for
11441617

.
osa-u.5
for
9266942

.
osa-u.5
for
4339683

.
osa-u.5
for
4325312

.
zma-u.5
for
100382806

.
zma-u.5
for
100282843

.
zma-u.5
for
100193260

.


Ortholog ID: 1880
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol RAN3 RAN-1 LOC100813067 LOC100305680 RAN1 RAN2A LOC4325312 LOC4339683 LOC100382806 LOC103637360 LOC103856413 LOC103851319 LOC100250818 LOC100266996 LOC7462975 LOC7495759 LOC25490031 LOC25490032 LOC123183217 LOC123147656 LOC123407682 LOC123451266 LOC107901184 LOC107962635 LOC106386725 LOC106420814 CHLRE_03g191050v5 LOC110433845 LOC8082248 LOC102595895 LOC102595232 LOC102608440 LOC102612964 LOC100838986 LOC100845165 LOC107765348 LOC107829920
Function* RAN GTPase 3 RAS-related nuclear protein-1 GTP-binding nuclear protein Ran-3 uncharacterized LOC100305680 Ran protein/TC4 protein GTP-binding nuclear protein Ran2A GTP-binding nuclear protein Ran-1-like GTP-binding nuclear protein Ran-2-like uncharacterized LOC100382806 GTP-binding nuclear protein Ran1B GTP-binding nuclear protein Ran-2 GTP-binding nuclear protein Ran-2 GTP-binding nuclear protein Ran-3 GTP-binding nuclear protein Ran-3 GTP-binding nuclear protein Ran-3 GTP-binding nuclear protein Ran-3 GTP-binding nuclear protein Ran/TC4 GTP-binding nuclear protein Ran/TC4 GTP-binding nuclear protein Ran-2 GTP-binding nuclear protein Ran-2 GTP-binding nuclear protein Ran-3 GTP-binding nuclear protein Ran-2 GTP-binding nuclear protein Ran-3 GTP-binding nuclear protein Ran-3 GTP-binding nuclear protein Ran-2 GTP-binding nuclear protein Ran-3 uncharacterized protein GTP-binding nuclear protein Ran-2-like GTP-binding nuclear protein Ran-3 GTP-binding nuclear protein Ran2-like GTP-binding nuclear protein Ran2 GTP-binding nuclear protein Ran-3 GTP-binding nuclear protein Ran1B GTP-binding nuclear protein Ran-1 GTP-binding nuclear protein Ran-3 GTP-binding nuclear protein Ran-B1-like GTP-binding nuclear protein Ran-A1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 10
ath01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
ath03008 Ribosome biogenesis in eukaryotes 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 10
gma03008 Ribosome biogenesis in eukaryotes 9
gma03250 Viral life cycle - HIV-1 9
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 10
gma03008 Ribosome biogenesis in eukaryotes 9
gma03250 Viral life cycle - HIV-1 9
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
sly03008 Ribosome biogenesis in eukaryotes 3
sly03013 Nucleocytoplasmic transport 3
sly03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
sly03008 Ribosome biogenesis in eukaryotes 3
sly03013 Nucleocytoplasmic transport 3
sly03250 Viral life cycle - HIV-1 3
sly00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 5
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 4
osa03008 Ribosome biogenesis in eukaryotes 2
osa03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 5
zma03008 Ribosome biogenesis in eukaryotes 4
zma03250 Viral life cycle - HIV-1 4
zma04144 Endocytosis 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 5
bra03008 Ribosome biogenesis in eukaryotes 5
bra03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 5
bra03008 Ribosome biogenesis in eukaryotes 5
bra03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi00190 Oxidative phosphorylation 2
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 5
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03250 Viral life cycle - HIV-1 3
ppo03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03008 Ribosome biogenesis in eukaryotes 3
ppo03250 Viral life cycle - HIV-1 3
ppo00190 Oxidative phosphorylation 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 8
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03013 Nucleocytoplasmic transport 3
mtr03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03013 Nucleocytoplasmic transport 3
mtr03250 Viral life cycle - HIV-1 3
mtr03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 10
tae04120 Ubiquitin mediated proteolysis 6
tae03008 Ribosome biogenesis in eukaryotes 5
tae03250 Viral life cycle - HIV-1 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 8
tae03008 Ribosome biogenesis in eukaryotes 5
tae03250 Viral life cycle - HIV-1 5
tae04120 Ubiquitin mediated proteolysis 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi03013 Nucleocytoplasmic transport 6
ghi03250 Viral life cycle - HIV-1 6
ghi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi03013 Nucleocytoplasmic transport 6
ghi03250 Viral life cycle - HIV-1 6
ghi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03008 Ribosome biogenesis in eukaryotes 4
bna03250 Viral life cycle - HIV-1 4
bna00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03013 Nucleocytoplasmic transport 4
bna03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 4
cre03040 Spliceosome 2
cre04144 Endocytosis 2
cre03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03013 Nucleocytoplasmic transport 2
sbi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03013 Nucleocytoplasmic transport 3
sbi03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 5
sot03008 Ribosome biogenesis in eukaryotes 4
sot03010 Ribosome 4
sot00480 Glutathione metabolism 3
sot03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 5
sot03010 Ribosome 5
sot03008 Ribosome biogenesis in eukaryotes 3
sot03250 Viral life cycle - HIV-1 3
sot00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit04141 Protein processing in endoplasmic reticulum 2
cit03008 Ribosome biogenesis in eukaryotes 2
cit03013 Nucleocytoplasmic transport 2
cit03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 7
cit03250 Viral life cycle - HIV-1 3
cit03010 Ribosome 3
cit03008 Ribosome biogenesis in eukaryotes 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 11
bdi01230 Biosynthesis of amino acids 11
bdi00010 Glycolysis / Gluconeogenesis 9
bdi00710 Carbon fixation by Calvin cycle 7
bdi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03013 Nucleocytoplasmic transport 3
bdi03250 Viral life cycle - HIV-1 3
bdi00010 Glycolysis / Gluconeogenesis 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 6
nta03008 Ribosome biogenesis in eukaryotes 4
nta03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 6
nta03008 Ribosome biogenesis in eukaryotes 4
nta03250 Viral life cycle - HIV-1 4
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835612 832123 100813067 100305680 778289 778290 4325312 4339683 100382806 103637360 103856413 103851319 100250818 100266996 7462975 7495759 25490031 25490032 123183217 123147656 123407682 123451266 107901184 107962635 106386725 106420814 5717533 110433845 8082248 102595895 102595232 102608440 102612964 100838986 100845165 107765348 107829920
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