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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   778303   branched chain alpha-keto acid dehydrogenase E1-alpha subunit 
 sly-r.6   778303   branched chain alpha-keto acid dehydrogenase E1-alpha subunit 
 sly-u.5   101254378   2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial 
 sly-u.5   101267118   2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 
 ath-u.5   AT5G09300   thiamine diphosphate-binding fold (THDP-binding) superfamily protein 
 ath-u.5   AT1G21400   thiamine diphosphate-binding fold (THDP-binding) superfamily protein 
 gma-u.5   100796766   2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 
 gma-u.5   100789693   2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 
 gma-u.5   100779198   2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 
 vvi-u.5   100258429   2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 
 vvi-u.5   100245451   2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial 
 ppo-u.5   7466848   2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 
 ppo-u.5   7469191   2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial 
 mtr-u.5   25489740   2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial 
 mtr-u.5   11424992   2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 
 osa-u.5   4351684   2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 
 zma-u.5   100191513   uncharacterized LOC100191513 

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Top 50 coexpressed genes to 778303 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 778303 (sly-u.5 coexpression data)

CoexMap"778303"


slyLOC778303 | Entrez gene ID : 778303      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 3 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00280 [list] [network] Valine, leucine and isoleucine degradation (67 genes)
sly00640 [list] [network] Propanoate metabolism (52 genes)
sly00785 [list] [network] Lipoic acid metabolism (36 genes)
sly01210 [list] [network] 2-Oxocarboxylic acid metabolism (89 genes)
GO BP
GO:0009083 [list] [network] branched-chain amino acid catabolic process  (32 genes)  IEA  
GO CC
GO MF
GO:0016624 [list] [network] oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor  (15 genes)  IEA  
Protein NP_001234066.2 [sequence] [blastp]
XP_010322325.1 [sequence] [blastp]
XP_069154834.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  chlo_mito 5,  mito 4  (predict for NP_001234066.2)
chlo 6,  mito 4  (predict for XP_010322325.1)
chlo 5,  chlo_mito 5,  mito 4  (predict for XP_069154834.1)
Subcellular
localization
TargetP
mito 9  (predict for NP_001234066.2)
mito 9  (predict for XP_010322325.1)
mito 9  (predict for XP_069154834.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
778303

.
sly-r.6
for
778303

.
sly-u.5
for
101254378

.
sly-u.5
for
101267118

.
ath-u.5
for
AT5G09300

.
ath-u.5
for
AT1G21400

.
gma-u.5
for
100796766

.
gma-u.5
for
100789693

.
gma-u.5
for
100779198

.
vvi-u.5
for
100258429

.
vvi-u.5
for
100245451

.
ppo-u.5
for
7466848

.
ppo-u.5
for
7469191

.
mtr-u.5
for
25489740

.
mtr-u.5
for
11424992

.
osa-u.5
for
4351684

.
zma-u.5
for
100191513

.


Ortholog ID: 3038
Species ath ath gma gma sly osa zma bra bra vvi vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit cit bdi nta nta
Symbol AT5G09300 AT1G21400 LOC100796766 LOC100789693 LOC778303 LOC4351684 LOC100191513 LOC103835749 LOC103855815 LOC100258429 LOC100245451 LOC7466848 LOC25489740 LOC11424992 LOC123091068 LOC100682406 LOC123395411 LOC107935806 LOC107959621 LOC106425878 LOC106384942 CHLRE_12g539900v5 LOC110429745 LOC102582020 LOC102587414 LOC102608790 LOC102627777 LOC100845243 LOC107786009 LOC107771953
Function* thiamine diphosphate-binding fold (THDP-binding) superfamily protein thiamine diphosphate-binding fold (THDP-binding) superfamily protein 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial branched chain alpha-keto acid dehydrogenase E1-alpha subunit 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial uncharacterized LOC100191513 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial-like 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial uncharacterized protein 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial-like 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial-like 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 4
ath00280 Valine, leucine and isoleucine degradation 3
ath04075 Plant hormone signal transduction 3
ath00250 Alanine, aspartate and glutamate metabolism 3
ath00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 7
ath01230 Biosynthesis of amino acids 3
ath00410 beta-Alanine metabolism 3
ath00640 Propanoate metabolism 3
ath01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 11
gma01210 2-Oxocarboxylic acid metabolism 6
gma00640 Propanoate metabolism 5
gma00785 Lipoic acid metabolism 4
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 11
gma00640 Propanoate metabolism 5
gma01210 2-Oxocarboxylic acid metabolism 5
gma00785 Lipoic acid metabolism 4
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00062 Fatty acid elongation 5
sly04626 Plant-pathogen interaction 5
sly02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 9
osa00640 Propanoate metabolism 4
osa00310 Lysine degradation 3
osa00071 Fatty acid degradation 3
osa00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 9
zma00640 Propanoate metabolism 4
zma01210 2-Oxocarboxylic acid metabolism 4
zma00785 Lipoic acid metabolism 3
zma00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01210 2-Oxocarboxylic acid metabolism 4
bra00280 Valine, leucine and isoleucine degradation 3
bra00640 Propanoate metabolism 3
bra00785 Lipoic acid metabolism 3
bra01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 2
vvi04517 IgSF CAM signaling 2
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 4
mtr00520 Amino sugar and nucleotide sugar metabolism 3
mtr01250 Biosynthesis of nucleotide sugars 3
mtr00500 Starch and sucrose metabolism 3
mtr01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 6
mtr00500 Starch and sucrose metabolism 3
mtr00640 Propanoate metabolism 2
mtr00785 Lipoic acid metabolism 2
mtr01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 5
tae01210 2-Oxocarboxylic acid metabolism 5
tae01230 Biosynthesis of amino acids 4
tae00640 Propanoate metabolism 4
tae00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 6
tae00260 Glycine, serine and threonine metabolism 5
tae00280 Valine, leucine and isoleucine degradation 5
tae01210 2-Oxocarboxylic acid metabolism 5
tae00640 Propanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 9
hvu00640 Propanoate metabolism 5
hvu01210 2-Oxocarboxylic acid metabolism 4
hvu01200 Carbon metabolism 3
hvu00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 5
ghi00330 Arginine and proline metabolism 3
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 5
ghi00330 Arginine and proline metabolism 3
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00280 Valine, leucine and isoleucine degradation 6
bna00310 Lysine degradation 5
bna00640 Propanoate metabolism 4
bna00785 Lipoic acid metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 4
bna00541 Biosynthesis of various nucleotide sugars 4
bna01250 Biosynthesis of nucleotide sugars 4
bna00280 Valine, leucine and isoleucine degradation 2
bna00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00280 Valine, leucine and isoleucine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00280 Valine, leucine and isoleucine degradation 5
sbi01210 2-Oxocarboxylic acid metabolism 4
sbi00310 Lysine degradation 3
sbi00640 Propanoate metabolism 3
sbi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00073 Cutin, suberine and wax biosynthesis 4
sot00062 Fatty acid elongation 4
sot04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 8
bdi00640 Propanoate metabolism 4
bdi01210 2-Oxocarboxylic acid metabolism 4
bdi00785 Lipoic acid metabolism 3
bdi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 5
nta00561 Glycerolipid metabolism 5
nta01210 2-Oxocarboxylic acid metabolism 3
nta00052 Galactose metabolism 3
nta00600 Sphingolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 3
nta00280 Valine, leucine and isoleucine degradation 2
nta00640 Propanoate metabolism 2
nta00785 Lipoic acid metabolism 2
nta01210 2-Oxocarboxylic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830789 838739 100796766 100789693 778303 4351684 100191513 103835749 103855815 100258429 100245451 7466848 25489740 11424992 123091068 100682406 123395411 107935806 107959621 106425878 106384942 5719476 110429745 102582020 102587414 102608790 102627777 100845243 107786009 107771953
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