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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   778326   ferredoxin--nitrite reductase, chloroplastic 
 sly-r.6   778326   ferredoxin--nitrite reductase, chloroplastic 
 sly-u.5   nii1   nitrite reductase 
 ath-u.5   NIR1   nitrite reductase 1 
 gma-u.5   NIR   nitrate reductase 
 gma-u.5   100775519   ferredoxin--nitrite reductase, chloroplastic 
 vvi-u.5   100253671   ferredoxin--nitrite reductase, chloroplastic-like 
 ppo-u.5   18097785   ferredoxin--nitrite reductase, chloroplastic 
 mtr-u.5   11445727   ferredoxin--nitrite reductase, chloroplastic 
 osa-u.5   4326014   ferredoxin--nitrite reductase, chloroplastic-like 
 osa-u.5   4330835   ferredoxin--nitrite reductase, chloroplastic-like 
 zma-u.5   542264   nitrite reductase2 
 zma-u.5   103627781   ferredoxin--nitrite reductase, chloroplastic-like 

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Top 50 coexpressed genes to 778326 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 778326 (sly-u.5 coexpression data)

CoexMap"778326"


slyLOC778326 | Entrez gene ID : 778326      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00910 [list] [network] Nitrogen metabolism (36 genes)
sly01310 [list] [network] Nitrogen cycle (3 genes)
GO BP
GO CC
GO MF
GO:0051536 [list] [network] iron-sulfur cluster binding  (87 genes)  IEA  
GO:0020037 [list] [network] heme binding  (451 genes)  IEA  
GO:0016491 [list] [network] oxidoreductase activity  (1359 genes)  IEA  
Protein XP_004248736.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 2,  mito 2  (predict for XP_004248736.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_004248736.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
778326

.
sly-r.6
for
778326

.
sly-u.5
for
nii1

.
ath-u.5
for
NIR1

.
gma-u.5
for
NIR

.
gma-u.5
for
100775519

.
vvi-u.5
for
100253671

.
ppo-u.5
for
18097785

.
mtr-u.5
for
11445727

.
osa-u.5
for
4326014

.
osa-u.5
for
4330835

.
zma-u.5
for
542264

.
zma-u.5
for
103627781

.


Ortholog ID: 6802
Species ath gma gma sly sly osa osa zma zma bra bra vvi ppo mtr tae tae hvu ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol NIR1 LOC100775519 NIR nii1 LOC778326 LOC4330835 LOC4326014 LOC103627781 LOC542264 LOC103844354 LOC103848008 LOC100253671 LOC18097785 LOC11445727 LOC100240699 LOC123138457 LOC123402599 LOC107894267 LOC106361629 LOC106445633 CHLRE_09g410750v5 LOC8075200 LOC102596437 NIR LOC102616714 LOC100834109 LOC107798816 LOC107765655
Function* nitrite reductase 1 ferredoxin--nitrite reductase, chloroplastic nitrate reductase nitrite reductase ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic-like ferredoxin--nitrite reductase, chloroplastic-like ferredoxin--nitrite reductase, chloroplastic-like nitrite reductase2 ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic-like ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic ferredoxin-nitrite reductase ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic uncharacterized protein ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic-like ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic ferredoxin--nitrite reductase, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00910 Nitrogen metabolism 4
ath01230 Biosynthesis of amino acids 3
ath01310 Nitrogen cycle 3
ath00030 Pentose phosphate pathway 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 6
gma01310 Nitrogen cycle 6
gma01200 Carbon metabolism 4
gma01240 Biosynthesis of cofactors 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 6
gma01310 Nitrogen cycle 6
gma01200 Carbon metabolism 4
gma04075 Plant hormone signal transduction 2
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 4
sly00630 Glyoxylate and dicarboxylate metabolism 4
sly01230 Biosynthesis of amino acids 3
sly00910 Nitrogen metabolism 3
sly00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 5
sly04075 Plant hormone signal transduction 5
sly01200 Carbon metabolism 3
sly00010 Glycolysis / Gluconeogenesis 2
sly00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 4
osa01310 Nitrogen cycle 4
osa00195 Photosynthesis 2
osa00030 Pentose phosphate pathway 2
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 5
osa01310 Nitrogen cycle 5
osa01200 Carbon metabolism 3
osa00195 Photosynthesis 2
osa00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 4
zma01310 Nitrogen cycle 3
zma01200 Carbon metabolism 3
zma00195 Photosynthesis 3
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 4
zma01310 Nitrogen cycle 3
zma01200 Carbon metabolism 3
zma00195 Photosynthesis 3
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 5
bra00910 Nitrogen metabolism 5
bra01310 Nitrogen cycle 5
bra00030 Pentose phosphate pathway 3
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra00910 Nitrogen metabolism 4
bra01310 Nitrogen cycle 4
bra00620 Pyruvate metabolism 3
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00910 Nitrogen metabolism 3
vvi01240 Biosynthesis of cofactors 3
vvi01310 Nitrogen cycle 2
vvi00760 Nicotinate and nicotinamide metabolism 2
vvi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00910 Nitrogen metabolism 3
ppo01310 Nitrogen cycle 3
ppo00030 Pentose phosphate pathway 3
ppo00480 Glutathione metabolism 3
ppo01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00910 Nitrogen metabolism 4
mtr01240 Biosynthesis of cofactors 3
mtr01310 Nitrogen cycle 3
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00910 Nitrogen metabolism 4
tae01310 Nitrogen cycle 4
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00910 Nitrogen metabolism 8
tae01310 Nitrogen cycle 8
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00620 Pyruvate metabolism 2
hvu01200 Carbon metabolism 2
hvu00910 Nitrogen metabolism 2
hvu01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 7
ghi01310 Nitrogen cycle 7
ghi00710 Carbon fixation by Calvin cycle 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 6
bna00030 Pentose phosphate pathway 4
bna00480 Glutathione metabolism 4
bna00910 Nitrogen metabolism 4
bna01310 Nitrogen cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00910 Nitrogen metabolism 4
bna01310 Nitrogen cycle 4
bna00330 Arginine and proline metabolism 3
bna01200 Carbon metabolism 3
bna00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 3
cre04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00910 Nitrogen metabolism 6
sbi01310 Nitrogen cycle 4
sbi00030 Pentose phosphate pathway 2
sbi01200 Carbon metabolism 2
sbi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 6
sot01230 Biosynthesis of amino acids 5
sot00910 Nitrogen metabolism 4
sot00250 Alanine, aspartate and glutamate metabolism 2
sot00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 7
sot00620 Pyruvate metabolism 5
sot00630 Glyoxylate and dicarboxylate metabolism 3
sot00910 Nitrogen metabolism 3
sot01310 Nitrogen cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00910 Nitrogen metabolism 2
cit01310 Nitrogen cycle 2
cit00620 Pyruvate metabolism 2
cit00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00910 Nitrogen metabolism 3
bdi01310 Nitrogen cycle 3
bdi01240 Biosynthesis of cofactors 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01310 Nitrogen cycle 6
nta00910 Nitrogen metabolism 5
nta00920 Sulfur metabolism 4
nta00270 Cysteine and methionine metabolism 3
nta00460 Cyanoamino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00910 Nitrogen metabolism 6
nta01310 Nitrogen cycle 6
nta01240 Biosynthesis of cofactors 4
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816055 100775519 732631 778325 778326 4330835 4326014 103627781 542264 103844354 103848008 100253671 18097785 11445727 100240699 123138457 123402599 107894267 106361629 106445633 5722281 8075200 102596437 102581851 102616714 100834109 107798816 107765655
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