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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   APX6   thylakoid-bound ascorbate peroxidase 6 
 sly-r.6   APX6   thylakoid-bound ascorbate peroxidase 6 
 sly-u.5   APX7   stromal ascorbate peroxidase 7 
 ath-u.5   SAPX   stromal ascorbate peroxidase 
 ath-u.5   TAPX   thylakoidal ascorbate peroxidase 
 gma-u.5   100784258   probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial 
 gma-u.5   100802238   probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial 
 vvi-u.5   100254009   probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial 
 ppo-u.5   7463149   probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial 
 ppo-u.5   7460959   probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial 
 mtr-u.5   11414804   probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial 
 osa-u.5   4351663   probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial 
 osa-u.5   4335896   probable L-ascorbate peroxidase 7, chloroplastic 
 osa-u.5   4329643   probable L-ascorbate peroxidase 8, chloroplastic 
 zma-u.5   100194161   L-ascorbate peroxidase S chloroplastic/mitochondrial 
 zma-u.5   100283135   uncharacterized LOC100283135 
 zma-u.5   100193740   L-ascorbate peroxidase S chloroplastic/mitochondrial 

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Top 50 coexpressed genes to APX6 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to APX6 (sly-u.5 coexpression data)

CoexMap"778341"


slyAPX6 | Entrez gene ID : 778341    
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 2 1 2 1 3 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00053 [list] [network] Ascorbate and aldarate metabolism (66 genes)
sly00480 [list] [network] Glutathione metabolism (112 genes)
GO BP
GO:0034599 [list] [network] cellular response to oxidative stress  (33 genes)  IEA  
GO:0000302 [list] [network] response to reactive oxygen species  (39 genes)  IEA  
GO:0042744 [list] [network] hydrogen peroxide catabolic process  (133 genes)  IEA  
GO CC
GO MF
GO:0004601 [list] [network] peroxidase activity  (153 genes)  IEA  
GO:0020037 [list] [network] heme binding  (451 genes)  IEA  
Protein NP_001234631.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  extr 1,  vacu 1  (predict for NP_001234631.2)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001234631.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
APX6

.
sly-r.6
for
APX6

.
sly-u.5
for
APX7

.
ath-u.5
for
SAPX

.
ath-u.5
for
TAPX

.
gma-u.5
for
100784258

.
gma-u.5
for
100802238

.
vvi-u.5
for
100254009

.
ppo-u.5
for
7463149

.
ppo-u.5
for
7460959

.
mtr-u.5
for
11414804

.
osa-u.5
for
4351663

.
osa-u.5
for
4335896

.
osa-u.5
for
4329643

.
zma-u.5
for
100194161

.
zma-u.5
for
100283135

.
zma-u.5
for
100193740

.


Ortholog ID: 3118
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol SAPX TAPX LOC100784258 LOC100802238 APX6 APX7 LOC4335896 LOC4329643 LOC100194161 LOC100193740 LOC103838791 LOC103832195 LOC100254009 LOC7460959 LOC7463149 LOC11414804 LOC123189249 LOC123189250 LOC123426765 LOC123404272 LOC107924317 LOC107962527 LOC106446926 LOC106422138 CHLRE_02g087700v5 LOC8064261 LOC8076303 LOC102595667 LOC102591426 LOC102610460 LOC100836915 LOC100836984 LOC107792162 LOC107763284
Function* stromal ascorbate peroxidase thylakoidal ascorbate peroxidase probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial thylakoid-bound ascorbate peroxidase 6 stromal ascorbate peroxidase 7 probable L-ascorbate peroxidase 7, chloroplastic probable L-ascorbate peroxidase 8, chloroplastic L-ascorbate peroxidase S chloroplastic/mitochondrial L-ascorbate peroxidase S chloroplastic/mitochondrial L-ascorbate peroxidase S, chloroplastic/mitochondrial L-ascorbate peroxidase T, chloroplastic probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial probable L-ascorbate peroxidase 7, chloroplastic probable L-ascorbate peroxidase 7, chloroplastic probable L-ascorbate peroxidase 7, chloroplastic probable L-ascorbate peroxidase 8, chloroplastic probable L-ascorbate peroxidase 6, chloroplastic probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial L-ascorbate peroxidase S, chloroplastic/mitochondrial-like L-ascorbate peroxidase S, chloroplastic/mitochondrial uncharacterized protein probable L-ascorbate peroxidase 8, chloroplastic probable L-ascorbate peroxidase 6, chloroplastic probable L-ascorbate peroxidase 6, chloroplastic probable L-ascorbate peroxidase 6, chloroplastic probable L-ascorbate peroxidase 6, chloroplastic/mitochondrial probable L-ascorbate peroxidase 7, chloroplastic probable L-ascorbate peroxidase 8, chloroplastic probable L-ascorbate peroxidase 6, chloroplastic putative L-ascorbate peroxidase 6, chloroplastic/mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 4
ath00053 Ascorbate and aldarate metabolism 3
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00053 Ascorbate and aldarate metabolism 3
gma00480 Glutathione metabolism 3
gma01240 Biosynthesis of cofactors 2
gma00260 Glycine, serine and threonine metabolism 2
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 6
gma01212 Fatty acid metabolism 6
gma00053 Ascorbate and aldarate metabolism 4
gma00480 Glutathione metabolism 4
gma00780 Biotin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 4
osa01310 Nitrogen cycle 4
osa00480 Glutathione metabolism 3
osa00195 Photosynthesis 2
osa00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 3
osa00710 Carbon fixation by Calvin cycle 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 5
zma01210 2-Oxocarboxylic acid metabolism 3
zma00190 Oxidative phosphorylation 3
zma03040 Spliceosome 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00240 Pyrimidine metabolism 2
zma01240 Biosynthesis of cofactors 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra00190 Oxidative phosphorylation 2
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
bra00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 5
bra00710 Carbon fixation by Calvin cycle 4
bra01230 Biosynthesis of amino acids 3
bra00010 Glycolysis / Gluconeogenesis 2
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 7
ppo00710 Carbon fixation by Calvin cycle 5
ppo01230 Biosynthesis of amino acids 5
ppo00030 Pentose phosphate pathway 3
ppo00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 6
ppo01230 Biosynthesis of amino acids 5
ppo00710 Carbon fixation by Calvin cycle 4
ppo00010 Glycolysis / Gluconeogenesis 4
ppo00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 7
mtr01230 Biosynthesis of amino acids 6
mtr00020 Citrate cycle (TCA cycle) 3
mtr00620 Pyruvate metabolism 3
mtr00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 8
tae00480 Glutathione metabolism 8
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
tae00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00480 Glutathione metabolism 8
tae00053 Ascorbate and aldarate metabolism 7
tae01230 Biosynthesis of amino acids 6
tae00030 Pentose phosphate pathway 4
tae01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 4
hvu01200 Carbon metabolism 3
hvu00030 Pentose phosphate pathway 2
hvu00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 4
hvu00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi00053 Ascorbate and aldarate metabolism 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 6
ghi00053 Ascorbate and aldarate metabolism 5
ghi01200 Carbon metabolism 4
ghi00260 Glycine, serine and threonine metabolism 3
ghi00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 7
bna00270 Cysteine and methionine metabolism 7
bna00566 Sulfoquinovose metabolism 7
bna00620 Pyruvate metabolism 7
bna00630 Glyoxylate and dicarboxylate metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 7
bna00270 Cysteine and methionine metabolism 7
bna00566 Sulfoquinovose metabolism 7
bna00620 Pyruvate metabolism 7
bna00630 Glyoxylate and dicarboxylate metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04146 Peroxisome 2
cre00480 Glutathione metabolism 2
cre03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 9
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 6
sot00020 Citrate cycle (TCA cycle) 5
sot01210 2-Oxocarboxylic acid metabolism 4
sot00970 Aminoacyl-tRNA biosynthesis 3
sot00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 6
bdi00020 Citrate cycle (TCA cycle) 4
bdi01210 2-Oxocarboxylic acid metabolism 3
bdi01230 Biosynthesis of amino acids 3
bdi00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 9
bdi00630 Glyoxylate and dicarboxylate metabolism 7
bdi00710 Carbon fixation by Calvin cycle 6
bdi00260 Glycine, serine and threonine metabolism 2
bdi00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 7
nta00220 Arginine biosynthesis 4
nta01210 2-Oxocarboxylic acid metabolism 4
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 5
nta00220 Arginine biosynthesis 4
nta01210 2-Oxocarboxylic acid metabolism 4
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826396 844085 100784258 100802238 778341 101262528 4335896 4329643 100194161 100193740 103838791 103832195 100254009 7460959 7463149 11414804 123189249 123189250 123426765 123404272 107924317 107962527 106446926 106422138 5727425 8064261 8076303 102595667 102591426 102610460 100836915 100836984 107792162 107763284
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